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Cluster: HRGMv2_0552_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0552_22 HRGMv2_0552_22_9 10905 11555 + 1.C.113.1.3
NULL(UNKNOWN) HRGMv2_0552_22 HRGMv2_0552_22_10 11576 13477 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0552_22 HRGMv2_0552_22_11 13604 16480 - Metallophos | Pur_ac_phosph_N
CAZyme HRGMv2_0552_22 HRGMv2_0552_22_12 17046 19304 + GH92
sulfatase HRGMv2_0552_22 HRGMv2_0552_22_13 19376 21886 + S1_4
CAZyme HRGMv2_0552_22 HRGMv2_0552_22_14 21883 24585 + CBM67 | GH78
TC HRGMv2_0552_22 HRGMv2_0552_22_15 24697 25938 + 2.A.1.35.1
pfam HRGMv2_0552_22 HRGMv2_0552_22_16 27202 28377 - Metallophos | Pur_ac_phosph_N
CAZyme HRGMv2_0552_22 HRGMv2_0552_22_17 28477 30771 - GH92
Gene ID: HRGMv2_0552_22_9
Type: TC
Location: 10905 - 11555 (+)
Gene ID: HRGMv2_0552_22_10
Type:
Location: 11576 - 13477 (+)
Gene ID: HRGMv2_0552_22_11
Type: pfam
Location: 13604 - 16480 (-)
Gene ID: HRGMv2_0552_22_12
Type: CAZyme
Location: 17046 - 19304 (+)
Gene ID: HRGMv2_0552_22_13
Type: sulfatase
Location: 19376 - 21886 (+)
Gene ID: HRGMv2_0552_22_14
Type: CAZyme
Location: 21883 - 24585 (+)
Gene ID: HRGMv2_0552_22_15
Type: TC
Location: 24697 - 25938 (+)
Gene ID: HRGMv2_0552_22_16
Type: pfam
Location: 27202 - 28377 (-)
Gene ID: HRGMv2_0552_22_17
Type: CAZyme
Location: 28477 - 30771 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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