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Cluster: HRGMv2_0545_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0545_27 HRGMv2_0545_27_12 12308 14479 - GH36
CAZyme HRGMv2_0545_27 HRGMv2_0545_27_13 14776 15768 - GH43_34
pfam HRGMv2_0545_27 HRGMv2_0545_27_14 16128 16883 + GDPD
peptidase HRGMv2_0545_27 HRGMv2_0545_27_15 16957 17745 - S09.UNW
CAZyme HRGMv2_0545_27 HRGMv2_0545_27_16 17906 19897 - GH182
CAZyme HRGMv2_0545_27 HRGMv2_0545_27_17 19904 20908 - GH43_31
NULL(UNKNOWN) HRGMv2_0545_27 HRGMv2_0545_27_18 21288 23030 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0545_27 HRGMv2_0545_27_19 23125 26271 + 1.B.14.6.1
TC HRGMv2_0545_27 HRGMv2_0545_27_20 26296 28011 + 8.A.46.1.3
pfam HRGMv2_0545_27 HRGMv2_0545_27_21 28125 29093 + DUF5017
CAZyme HRGMv2_0545_27 HRGMv2_0545_27_22 29090 31048 + GH93
Gene ID: HRGMv2_0545_27_12
Type: CAZyme
Location: 12308 - 14479 (-)
Gene ID: HRGMv2_0545_27_13
Type: CAZyme
Location: 14776 - 15768 (-)
Gene ID: HRGMv2_0545_27_14
Type: pfam
Location: 16128 - 16883 (+)
Gene ID: HRGMv2_0545_27_15
Type: peptidase
Location: 16957 - 17745 (-)
Gene ID: HRGMv2_0545_27_16
Type: CAZyme
Location: 17906 - 19897 (-)
Gene ID: HRGMv2_0545_27_17
Type: CAZyme
Location: 19904 - 20908 (-)
Gene ID: HRGMv2_0545_27_18
Type:
Location: 21288 - 23030 (+)
Gene ID: HRGMv2_0545_27_19
Type: TC
Location: 23125 - 26271 (+)
Gene ID: HRGMv2_0545_27_20
Type: TC
Location: 26296 - 28011 (+)
Gene ID: HRGMv2_0545_27_21
Type: pfam
Location: 28125 - 29093 (+)
Gene ID: HRGMv2_0545_27_22
Type: CAZyme
Location: 29090 - 31048 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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