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Cluster: HRGMv2_0545_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0545_78 HRGMv2_0545_78_13 15376 16620 + 1.B.6.1.6
pfam HRGMv2_0545_78 HRGMv2_0545_78_14 16825 18162 + ELFV_dehydrog | ELFV_dehydrog_N
TF HRGMv2_0545_78 HRGMv2_0545_78_15 18249 18659 + FUR
TC HRGMv2_0545_78 HRGMv2_0545_78_16 18763 20709 + 3.A.3.6.10
pfam HRGMv2_0545_78 HRGMv2_0545_78_17 20716 21363 - Hydrolase | Hydrolase_like | HAD_2
pfam HRGMv2_0545_78 HRGMv2_0545_78_18 21392 23767 - Omp85
TC HRGMv2_0545_78 HRGMv2_0545_78_19 23770 25080 - 2.A.1.25.2
pfam HRGMv2_0545_78 HRGMv2_0545_78_20 25077 26042 - DUF4922
CAZyme HRGMv2_0545_78 HRGMv2_0545_78_21 26035 27516 - GT2
Gene ID: HRGMv2_0545_78_13
Type: TC
Location: 15376 - 16620 (+)
Gene ID: HRGMv2_0545_78_14
Type: pfam
Location: 16825 - 18162 (+)
Gene ID: HRGMv2_0545_78_15
Type: TF
Location: 18249 - 18659 (+)
Gene ID: HRGMv2_0545_78_16
Type: TC
Location: 18763 - 20709 (+)
Gene ID: HRGMv2_0545_78_17
Type: pfam
Location: 20716 - 21363 (-)
Gene ID: HRGMv2_0545_78_18
Type: pfam
Location: 21392 - 23767 (-)
Gene ID: HRGMv2_0545_78_19
Type: TC
Location: 23770 - 25080 (-)
Gene ID: HRGMv2_0545_78_20
Type: pfam
Location: 25077 - 26042 (-)
Gene ID: HRGMv2_0545_78_21
Type: CAZyme
Location: 26035 - 27516 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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