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Cluster: HRGMv2_0545_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0545_39 HRGMv2_0545_39_22 26454 28001 - CBM32 | GH43_24
peptidase HRGMv2_0545_39 HRGMv2_0545_39_23 28150 29067 + G04.UNW
STP HRGMv2_0545_39 HRGMv2_0545_39_24 29071 30537 - NUDIX
TC HRGMv2_0545_39 HRGMv2_0545_39_25 30545 31528 - 2.A.19.5.2
NULL(UNKNOWN) HRGMv2_0545_39 HRGMv2_0545_39_26 31556 32788 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0545_39 HRGMv2_0545_39_27 32821 33111 - Dabb
TC HRGMv2_0545_39 HRGMv2_0545_39_28 33134 34723 - 3.A.1.121.4
TC HRGMv2_0545_39 HRGMv2_0545_39_29 34768 36117 - 3.A.5.1.1
Gene ID: HRGMv2_0545_39_22
Type: CAZyme
Location: 26454 - 28001 (-)
Gene ID: HRGMv2_0545_39_23
Type: peptidase
Location: 28150 - 29067 (+)
Gene ID: HRGMv2_0545_39_24
Type: STP
Location: 29071 - 30537 (-)
Gene ID: HRGMv2_0545_39_25
Type: TC
Location: 30545 - 31528 (-)
Gene ID: HRGMv2_0545_39_26
Type:
Location: 31556 - 32788 (-)
Gene ID: HRGMv2_0545_39_27
Type: pfam
Location: 32821 - 33111 (-)
Gene ID: HRGMv2_0545_39_28
Type: TC
Location: 33134 - 34723 (-)
Gene ID: HRGMv2_0545_39_29
Type: TC
Location: 34768 - 36117 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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