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Cluster: HRGMv2_0542_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0542_27 HRGMv2_0542_27_14 14868 15491 - 2.A.115.2.14
TC HRGMv2_0542_27 HRGMv2_0542_27_15 15572 16936 - 2.A.66.1.32
pfam HRGMv2_0542_27 HRGMv2_0542_27_16 17002 18999 - FBPase_2
pfam HRGMv2_0542_27 HRGMv2_0542_27_17 19071 20216 - Glyco_transf_4 | Glyco_trans_4_4
CAZyme HRGMv2_0542_27 HRGMv2_0542_27_18 20213 21406 - GT2
pfam HRGMv2_0542_27 HRGMv2_0542_27_19 21403 22569 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam HRGMv2_0542_27 HRGMv2_0542_27_20 22649 23974 - AA_kinase | ACT_9
TC HRGMv2_0542_27 HRGMv2_0542_27_21 23999 24817 - 3.A.1.140.1
Gene ID: HRGMv2_0542_27_14
Type: TC
Location: 14868 - 15491 (-)
Gene ID: HRGMv2_0542_27_15
Type: TC
Location: 15572 - 16936 (-)
Gene ID: HRGMv2_0542_27_16
Type: pfam
Location: 17002 - 18999 (-)
Gene ID: HRGMv2_0542_27_17
Type: pfam
Location: 19071 - 20216 (-)
Gene ID: HRGMv2_0542_27_18
Type: CAZyme
Location: 20213 - 21406 (-)
Gene ID: HRGMv2_0542_27_19
Type: pfam
Location: 21403 - 22569 (-)
Gene ID: HRGMv2_0542_27_20
Type: pfam
Location: 22649 - 23974 (-)
Gene ID: HRGMv2_0542_27_21
Type: TC
Location: 23999 - 24817 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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