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Cluster: HRGMv2_0541_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0541_50 HRGMv2_0541_50_7 6178 7866 + 2.A.58.2.2
pfam HRGMv2_0541_50 HRGMv2_0541_50_8 8013 9515 - Acetyltransf_1 | CN_hydrolase
CAZyme HRGMv2_0541_50 HRGMv2_0541_50_9 9629 10714 - GT9
pfam HRGMv2_0541_50 HRGMv2_0541_50_10 10711 11316 - DUF4254
STP HRGMv2_0541_50 HRGMv2_0541_50_11 11508 12329 + PfkB
TC HRGMv2_0541_50 HRGMv2_0541_50_12 12518 14179 + 2.A.81.1.2
pfam HRGMv2_0541_50 HRGMv2_0541_50_13 14188 15954 - PseudoU_synth_2
TC HRGMv2_0541_50 HRGMv2_0541_50_14 15959 16705 - 3.A.1.13.2
Gene ID: HRGMv2_0541_50_7
Type: TC
Location: 6178 - 7866 (+)
Gene ID: HRGMv2_0541_50_8
Type: pfam
Location: 8013 - 9515 (-)
Gene ID: HRGMv2_0541_50_9
Type: CAZyme
Location: 9629 - 10714 (-)
Gene ID: HRGMv2_0541_50_10
Type: pfam
Location: 10711 - 11316 (-)
Gene ID: HRGMv2_0541_50_11
Type: STP
Location: 11508 - 12329 (+)
Gene ID: HRGMv2_0541_50_12
Type: TC
Location: 12518 - 14179 (+)
Gene ID: HRGMv2_0541_50_13
Type: pfam
Location: 14188 - 15954 (-)
Gene ID: HRGMv2_0541_50_14
Type: TC
Location: 15959 - 16705 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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