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Cluster: HRGMv2_0538_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0538_47 HRGMv2_0538_47_8 7337 8107 - 3.A.1.15.11
TC HRGMv2_0538_47 HRGMv2_0538_47_9 8104 8931 - 3.A.1.15.10
peptidase HRGMv2_0538_47 HRGMv2_0538_47_10 8948 9715 - G05.UPW
CAZyme HRGMv2_0538_47 HRGMv2_0538_47_11 9838 12081 - GH3
CAZyme HRGMv2_0538_47 HRGMv2_0538_47_12 12078 14081 - GH97
CAZyme HRGMv2_0538_47 HRGMv2_0538_47_13 14151 15167 - GH43_18
pfam HRGMv2_0538_47 HRGMv2_0538_47_14 15197 16864 - SusD_RagB | SusD-like_3
TC HRGMv2_0538_47 HRGMv2_0538_47_15 16891 17907 - 1.B.14.6.1
Gene ID: HRGMv2_0538_47_8
Type: TC
Location: 7337 - 8107 (-)
Gene ID: HRGMv2_0538_47_9
Type: TC
Location: 8104 - 8931 (-)
Gene ID: HRGMv2_0538_47_10
Type: peptidase
Location: 8948 - 9715 (-)
Gene ID: HRGMv2_0538_47_11
Type: CAZyme
Location: 9838 - 12081 (-)
Gene ID: HRGMv2_0538_47_12
Type: CAZyme
Location: 12078 - 14081 (-)
Gene ID: HRGMv2_0538_47_13
Type: CAZyme
Location: 14151 - 15167 (-)
Gene ID: HRGMv2_0538_47_14
Type: pfam
Location: 15197 - 16864 (-)
Gene ID: HRGMv2_0538_47_15
Type: TC
Location: 16891 - 17907 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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