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Cluster: HRGMv2_0538_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0538_42 HRGMv2_0538_42_9 6830 8866 - GH13_8
TC HRGMv2_0538_42 HRGMv2_0538_42_10 8959 10512 + 2.A.17.1.7
STP HRGMv2_0538_42 HRGMv2_0538_42_11 10642 13122 + HATPase_c | HisKA
NULL(UNKNOWN) HRGMv2_0538_42 HRGMv2_0538_42_12 13065 13466 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0538_42 HRGMv2_0538_42_13 13561 14898 + 1.B.17.2.10
TC HRGMv2_0538_42 HRGMv2_0538_42_14 14922 15932 + 2.A.6.3.7
TC HRGMv2_0538_42 HRGMv2_0538_42_15 15948 19088 + 2.A.6.3.6
Gene ID: HRGMv2_0538_42_9
Type: CAZyme
Location: 6830 - 8866 (-)
Gene ID: HRGMv2_0538_42_10
Type: TC
Location: 8959 - 10512 (+)
Gene ID: HRGMv2_0538_42_11
Type: STP
Location: 10642 - 13122 (+)
Gene ID: HRGMv2_0538_42_12
Type:
Location: 13065 - 13466 (+)
Gene ID: HRGMv2_0538_42_13
Type: TC
Location: 13561 - 14898 (+)
Gene ID: HRGMv2_0538_42_14
Type: TC
Location: 14922 - 15932 (+)
Gene ID: HRGMv2_0538_42_15
Type: TC
Location: 15948 - 19088 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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