Cluster: HRGMv2_0536_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0536_18 | HRGMv2_0536_18_17 | 17258 | 18595 | - | 3.A.5.1.1 |
| pfam | HRGMv2_0536_18 | HRGMv2_0536_18_18 | 18618 | 18971 | - | Asp_decarbox |
| NULL(UNKNOWN) | HRGMv2_0536_18 | HRGMv2_0536_18_19 | 19061 | 19711 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0536_18 | HRGMv2_0536_18_20 | 19729 | 22284 | - | 3.A.12.1.1 |
| peptidase | HRGMv2_0536_18 | HRGMv2_0536_18_21 | 22569 | 24311 | - | S41.UPA |
| CAZyme | HRGMv2_0536_18 | HRGMv2_0536_18_22 | 24383 | 25420 | - | GT27 |
Gene ID: HRGMv2_0536_18_17
Type: TC
Location: 17258 - 18595 (-)
Type: TC
Location: 17258 - 18595 (-)
Gene ID: HRGMv2_0536_18_18
Type: pfam
Location: 18618 - 18971 (-)
Type: pfam
Location: 18618 - 18971 (-)
Gene ID: HRGMv2_0536_18_19
Type:
Location: 19061 - 19711 (-)
Type:
Location: 19061 - 19711 (-)
Gene ID: HRGMv2_0536_18_20
Type: TC
Location: 19729 - 22284 (-)
Type: TC
Location: 19729 - 22284 (-)
Gene ID: HRGMv2_0536_18_21
Type: peptidase
Location: 22569 - 24311 (-)
Type: peptidase
Location: 22569 - 24311 (-)
Gene ID: HRGMv2_0536_18_22
Type: CAZyme
Location: 24383 - 25420 (-)
Type: CAZyme
Location: 24383 - 25420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp947290775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.