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Cluster: HRGMv2_0528_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0528_47 HRGMv2_0528_47_21 23592 24821 + 9.A.25.1.1
TC HRGMv2_0528_47 HRGMv2_0528_47_22 24957 25886 + 9.A.25.1.1
TC HRGMv2_0528_47 HRGMv2_0528_47_23 25890 27440 + 9.A.25.1.1
pfam HRGMv2_0528_47 HRGMv2_0528_47_24 27449 28528 + GldN
TC HRGMv2_0528_47 HRGMv2_0528_47_25 28689 29279 + 2.A.51.1.6
TC HRGMv2_0528_47 HRGMv2_0528_47_26 29298 29891 + 2.A.51.1.6
CAZyme HRGMv2_0528_47 HRGMv2_0528_47_27 30030 30608 - GH108
Gene ID: HRGMv2_0528_47_21
Type: TC
Location: 23592 - 24821 (+)
Gene ID: HRGMv2_0528_47_22
Type: TC
Location: 24957 - 25886 (+)
Gene ID: HRGMv2_0528_47_23
Type: TC
Location: 25890 - 27440 (+)
Gene ID: HRGMv2_0528_47_24
Type: pfam
Location: 27449 - 28528 (+)
Gene ID: HRGMv2_0528_47_25
Type: TC
Location: 28689 - 29279 (+)
Gene ID: HRGMv2_0528_47_26
Type: TC
Location: 29298 - 29891 (+)
Gene ID: HRGMv2_0528_47_27
Type: CAZyme
Location: 30030 - 30608 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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