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Cluster: HRGMv2_0525_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_2 1111 2541 - GH125
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_3 2558 4168 - GH63
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_4 4388 7306 - GH92
pfam HRGMv2_0525_5 HRGMv2_0525_5_5 7413 8966 - SusD_RagB | SusD-like_3
TC HRGMv2_0525_5 HRGMv2_0525_5_6 8977 12294 - 1.B.14.6.2
pfam HRGMv2_0525_5 HRGMv2_0525_5_7 12509 12793 - FecR_C
sulfatase HRGMv2_0525_5 HRGMv2_0525_5_8 12984 14423 - S1_20
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_9 14435 16729 - GH20
TC HRGMv2_0525_5 HRGMv2_0525_5_10 16752 17705 - 1.C.12.3.1
Gene ID: HRGMv2_0525_5_2
Type: CAZyme
Location: 1111 - 2541 (-)
Gene ID: HRGMv2_0525_5_3
Type: CAZyme
Location: 2558 - 4168 (-)
Gene ID: HRGMv2_0525_5_4
Type: CAZyme
Location: 4388 - 7306 (-)
Gene ID: HRGMv2_0525_5_5
Type: pfam
Location: 7413 - 8966 (-)
Gene ID: HRGMv2_0525_5_6
Type: TC
Location: 8977 - 12294 (-)
Gene ID: HRGMv2_0525_5_7
Type: pfam
Location: 12509 - 12793 (-)
Gene ID: HRGMv2_0525_5_8
Type: sulfatase
Location: 12984 - 14423 (-)
Gene ID: HRGMv2_0525_5_9
Type: CAZyme
Location: 14435 - 16729 (-)
Gene ID: HRGMv2_0525_5_10
Type: TC
Location: 16752 - 17705 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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