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Cluster: HRGMv2_0525_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0525_49 HRGMv2_0525_49_2 885 1835 + GT2
pfam HRGMv2_0525_49 HRGMv2_0525_49_3 1840 2334 + DUF6452
pfam HRGMv2_0525_49 HRGMv2_0525_49_4 2324 3007 + DUF6048
TC HRGMv2_0525_49 HRGMv2_0525_49_5 3008 3583 + 2.A.107.1.2
pfam HRGMv2_0525_49 HRGMv2_0525_49_6 3598 4608 + ApbE
STP HRGMv2_0525_49 HRGMv2_0525_49_7 4709 5569 - Sigma70_r2 | Sigma70_r3 | Sigma70_r4
TC HRGMv2_0525_49 HRGMv2_0525_49_8 5841 7340 - 9.B.160.1.10
TC HRGMv2_0525_49 HRGMv2_0525_49_9 7997 9310 + 9.B.126.2.2
Gene ID: HRGMv2_0525_49_2
Type: CAZyme
Location: 885 - 1835 (+)
Gene ID: HRGMv2_0525_49_3
Type: pfam
Location: 1840 - 2334 (+)
Gene ID: HRGMv2_0525_49_4
Type: pfam
Location: 2324 - 3007 (+)
Gene ID: HRGMv2_0525_49_5
Type: TC
Location: 3008 - 3583 (+)
Gene ID: HRGMv2_0525_49_6
Type: pfam
Location: 3598 - 4608 (+)
Gene ID: HRGMv2_0525_49_7
Type: STP
Location: 4709 - 5569 (-)
Gene ID: HRGMv2_0525_49_8
Type: TC
Location: 5841 - 7340 (-)
Gene ID: HRGMv2_0525_49_9
Type: TC
Location: 7997 - 9310 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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