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Cluster: HRGMv2_0525_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_12 HRGMv2_0525_12_30 39365 39826 + 9.B.27.3.3
pfam HRGMv2_0525_12 HRGMv2_0525_12_31 39829 40485 + Methyltransf_30
pfam HRGMv2_0525_12 HRGMv2_0525_12_32 40576 41421 + ZnuA
TC HRGMv2_0525_12 HRGMv2_0525_12_33 41447 42217 + 3.A.1.15.11
pfam HRGMv2_0525_12 HRGMv2_0525_12_34 42423 45746 + TMEM260-like
CAZyme HRGMv2_0525_12 HRGMv2_0525_12_35 45870 46481 + CE4
CAZyme HRGMv2_0525_12 HRGMv2_0525_12_36 47055 48929 + CBM32 | GH29
TC HRGMv2_0525_12 HRGMv2_0525_12_37 49007 52183 + 1.B.14.6.1
TC HRGMv2_0525_12 HRGMv2_0525_12_38 52208 53887 + 8.A.46.1.6
CAZyme HRGMv2_0525_12 HRGMv2_0525_12_39 54084 56591 - GH2
CAZyme HRGMv2_0525_12 HRGMv2_0525_12_40 56748 59171 - GH2
CAZyme HRGMv2_0525_12 HRGMv2_0525_12_41 59182 60804 - GH30_4
TC HRGMv2_0525_12 HRGMv2_0525_12_42 60892 62601 - 8.A.46.1.3
TC HRGMv2_0525_12 HRGMv2_0525_12_43 62614 65652 - 1.B.14.6.1
Gene ID: HRGMv2_0525_12_30
Type: TC
Location: 39365 - 39826 (+)
Gene ID: HRGMv2_0525_12_31
Type: pfam
Location: 39829 - 40485 (+)
Gene ID: HRGMv2_0525_12_32
Type: pfam
Location: 40576 - 41421 (+)
Gene ID: HRGMv2_0525_12_33
Type: TC
Location: 41447 - 42217 (+)
Gene ID: HRGMv2_0525_12_34
Type: pfam
Location: 42423 - 45746 (+)
Gene ID: HRGMv2_0525_12_35
Type: CAZyme
Location: 45870 - 46481 (+)
Gene ID: HRGMv2_0525_12_36
Type: CAZyme
Location: 47055 - 48929 (+)
Gene ID: HRGMv2_0525_12_37
Type: TC
Location: 49007 - 52183 (+)
Gene ID: HRGMv2_0525_12_38
Type: TC
Location: 52208 - 53887 (+)
Gene ID: HRGMv2_0525_12_39
Type: CAZyme
Location: 54084 - 56591 (-)
Gene ID: HRGMv2_0525_12_40
Type: CAZyme
Location: 56748 - 59171 (-)
Gene ID: HRGMv2_0525_12_41
Type: CAZyme
Location: 59182 - 60804 (-)
Gene ID: HRGMv2_0525_12_42
Type: TC
Location: 60892 - 62601 (-)
Gene ID: HRGMv2_0525_12_43
Type: TC
Location: 62614 - 65652 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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