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Cluster: HRGMv2_0521_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0521_1 HRGMv2_0521_1_273 328631 329965 - 9.B.33.1.2
pfam HRGMv2_0521_1 HRGMv2_0521_1_274 329969 330499 - Hexapep | Hexapep | Hexapep_2
pfam HRGMv2_0521_1 HRGMv2_0521_1_275 330514 331299 - PRA-PH | MazG | MazG
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_276 331425 333590 + GH20
pfam HRGMv2_0521_1 HRGMv2_0521_1_277 333663 336257 - tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta
STP HRGMv2_0521_1 HRGMv2_0521_1_278 336436 337797 + PALP
TC HRGMv2_0521_1 HRGMv2_0521_1_279 337794 338693 - 2.A.7.3.57
Gene ID: HRGMv2_0521_1_273
Type: TC
Location: 328631 - 329965 (-)
Gene ID: HRGMv2_0521_1_274
Type: pfam
Location: 329969 - 330499 (-)
Gene ID: HRGMv2_0521_1_275
Type: pfam
Location: 330514 - 331299 (-)
Gene ID: HRGMv2_0521_1_276
Type: CAZyme
Location: 331425 - 333590 (+)
Gene ID: HRGMv2_0521_1_277
Type: pfam
Location: 333663 - 336257 (-)
Gene ID: HRGMv2_0521_1_278
Type: STP
Location: 336436 - 337797 (+)
Gene ID: HRGMv2_0521_1_279
Type: TC
Location: 337794 - 338693 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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