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Cluster: HRGMv2_0521_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_156 192245 194416 - GH97
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_157 194449 196197 - GH66
pfam HRGMv2_0521_1 HRGMv2_0521_1_158 196227 197690 - SusE | SusF_SusE | SusF_SusE
TC HRGMv2_0521_1 HRGMv2_0521_1_159 197718 199199 - 8.A.46.1.3
TC HRGMv2_0521_1 HRGMv2_0521_1_160 199213 202209 - 1.B.14.6.1
pfam HRGMv2_0521_1 HRGMv2_0521_1_161 202435 204084 - DUF6377
pfam HRGMv2_0521_1 HRGMv2_0521_1_162 204250 205002 + NlpE
TC HRGMv2_0521_1 HRGMv2_0521_1_163 205006 205440 - 2.A.7.34.6
Gene ID: HRGMv2_0521_1_156
Type: CAZyme
Location: 192245 - 194416 (-)
Gene ID: HRGMv2_0521_1_157
Type: CAZyme
Location: 194449 - 196197 (-)
Gene ID: HRGMv2_0521_1_158
Type: pfam
Location: 196227 - 197690 (-)
Gene ID: HRGMv2_0521_1_159
Type: TC
Location: 197718 - 199199 (-)
Gene ID: HRGMv2_0521_1_160
Type: TC
Location: 199213 - 202209 (-)
Gene ID: HRGMv2_0521_1_161
Type: pfam
Location: 202435 - 204084 (-)
Gene ID: HRGMv2_0521_1_162
Type: pfam
Location: 204250 - 205002 (+)
Gene ID: HRGMv2_0521_1_163
Type: TC
Location: 205006 - 205440 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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