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Cluster: HRGMv2_0521_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0521_1 HRGMv2_0521_1_131 158475 159803 + 3.A.1.109.6
TC HRGMv2_0521_1 HRGMv2_0521_1_132 159808 160848 + 8.A.1.1.1
pfam HRGMv2_0521_1 HRGMv2_0521_1_133 160854 162446 + MFS_1
TC HRGMv2_0521_1 HRGMv2_0521_1_134 162656 163843 + 9.B.169.1.1
pfam HRGMv2_0521_1 HRGMv2_0521_1_135 163856 164449 + Hydrolase | HAD_2
TC HRGMv2_0521_1 HRGMv2_0521_1_136 164526 167657 - 1.B.14.6.3
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_137 167984 170215 + GH77
peptidase HRGMv2_0521_1 HRGMv2_0521_1_138 170625 172433 + S41.UNA
TC HRGMv2_0521_1 HRGMv2_0521_1_139 172491 174707 - 3.A.10.1.10
Gene ID: HRGMv2_0521_1_131
Type: TC
Location: 158475 - 159803 (+)
Gene ID: HRGMv2_0521_1_132
Type: TC
Location: 159808 - 160848 (+)
Gene ID: HRGMv2_0521_1_133
Type: pfam
Location: 160854 - 162446 (+)
Gene ID: HRGMv2_0521_1_134
Type: TC
Location: 162656 - 163843 (+)
Gene ID: HRGMv2_0521_1_135
Type: pfam
Location: 163856 - 164449 (+)
Gene ID: HRGMv2_0521_1_136
Type: TC
Location: 164526 - 167657 (-)
Gene ID: HRGMv2_0521_1_137
Type: CAZyme
Location: 167984 - 170215 (+)
Gene ID: HRGMv2_0521_1_138
Type: peptidase
Location: 170625 - 172433 (+)
Gene ID: HRGMv2_0521_1_139
Type: TC
Location: 172491 - 174707 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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