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Cluster: HRGMv2_0521_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0521_7 HRGMv2_0521_7_98 145336 146916 - GH20
CAZyme HRGMv2_0521_7 HRGMv2_0521_7_99 146919 149252 - GH2
NULL(UNKNOWN) HRGMv2_0521_7 HRGMv2_0521_7_100 149269 151497 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0521_7 HRGMv2_0521_7_101 151703 152914 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0521_7 HRGMv2_0521_7_102 152911 155007 - GH164 | GH42
pfam HRGMv2_0521_7 HRGMv2_0521_7_103 155004 155978 - DUF5017
TC HRGMv2_0521_7 HRGMv2_0521_7_104 156005 157624 - 8.A.46.1.3
TC HRGMv2_0521_7 HRGMv2_0521_7_105 157644 160790 - 1.B.14.6.1
CAZyme HRGMv2_0521_7 HRGMv2_0521_7_106 160812 162221 - CE20
Gene ID: HRGMv2_0521_7_98
Type: CAZyme
Location: 145336 - 146916 (-)
Gene ID: HRGMv2_0521_7_99
Type: CAZyme
Location: 146919 - 149252 (-)
Gene ID: HRGMv2_0521_7_100
Type:
Location: 149269 - 151497 (-)
Gene ID: HRGMv2_0521_7_101
Type:
Location: 151703 - 152914 (-)
Gene ID: HRGMv2_0521_7_102
Type: CAZyme
Location: 152911 - 155007 (-)
Gene ID: HRGMv2_0521_7_103
Type: pfam
Location: 155004 - 155978 (-)
Gene ID: HRGMv2_0521_7_104
Type: TC
Location: 156005 - 157624 (-)
Gene ID: HRGMv2_0521_7_105
Type: TC
Location: 157644 - 160790 (-)
Gene ID: HRGMv2_0521_7_106
Type: CAZyme
Location: 160812 - 162221 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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