Cluster: HRGMv2_0521_CGC18
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate: beta-glucan
- Genome ID: HRGMv2_0521
- CGC Family ID: CGCFAM_00213
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0521_5 | HRGMv2_0521_5_45 | 45097 | 46926 | + | 3.A.1.135.5 |
| pfam | HRGMv2_0521_5 | HRGMv2_0521_5_46 | 47090 | 48436 | + | DUF362 |
| CAZyme | HRGMv2_0521_5 | HRGMv2_0521_5_47 | 48594 | 49904 | - | CBM6 | GH128 |
| CAZyme | HRGMv2_0521_5 | HRGMv2_0521_5_48 | 49915 | 50856 | - | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_0521_5 | HRGMv2_0521_5_49 | 50941 | 51741 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0521_5 | HRGMv2_0521_5_50 | 51785 | 53410 | - | 8.A.46.1.3 |
| TC | HRGMv2_0521_5 | HRGMv2_0521_5_51 | 53424 | 56516 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0521_5 | HRGMv2_0521_5_52 | 56535 | 58796 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_0521_5 | HRGMv2_0521_5_53 | 59456 | 61783 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0521_5 | HRGMv2_0521_5_54 | 62218 | 63462 | - | GH5_46 |
| CAZyme | HRGMv2_0521_5 | HRGMv2_0521_5_55 | 63475 | 65283 | - | GH2 |
Gene ID: HRGMv2_0521_5_45
Type: TC
Location: 45097 - 46926 (+)
Type: TC
Location: 45097 - 46926 (+)
Gene ID: HRGMv2_0521_5_46
Type: pfam
Location: 47090 - 48436 (+)
Type: pfam
Location: 47090 - 48436 (+)
Gene ID: HRGMv2_0521_5_47
Type: CAZyme
Location: 48594 - 49904 (-)
Type: CAZyme
Location: 48594 - 49904 (-)
Gene ID: HRGMv2_0521_5_48
Type: CAZyme
Location: 49915 - 50856 (-)
Type: CAZyme
Location: 49915 - 50856 (-)
Gene ID: HRGMv2_0521_5_49
Type:
Location: 50941 - 51741 (-)
Type:
Location: 50941 - 51741 (-)
Gene ID: HRGMv2_0521_5_50
Type: TC
Location: 51785 - 53410 (-)
Type: TC
Location: 51785 - 53410 (-)
Gene ID: HRGMv2_0521_5_51
Type: TC
Location: 53424 - 56516 (-)
Type: TC
Location: 53424 - 56516 (-)
Gene ID: HRGMv2_0521_5_52
Type: CAZyme
Location: 56535 - 58796 (-)
Type: CAZyme
Location: 56535 - 58796 (-)
Gene ID: HRGMv2_0521_5_53
Type:
Location: 59456 - 61783 (+)
Type:
Location: 59456 - 61783 (+)
Gene ID: HRGMv2_0521_5_54
Type: CAZyme
Location: 62218 - 63462 (-)
Type: CAZyme
Location: 62218 - 63462 (-)
Gene ID: HRGMv2_0521_5_55
Type: CAZyme
Location: 63475 - 65283 (-)
Type: CAZyme
Location: 63475 - 65283 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.