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Cluster: HRGMv2_0521_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_145 183601 185826 - GH3
pfam HRGMv2_0521_4 HRGMv2_0521_4_146 186044 187747 - DUF6377
pfam HRGMv2_0521_4 HRGMv2_0521_4_147 187915 188295 - Ribosomal_L19
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_148 188541 190106 - GT83
TC HRGMv2_0521_4 HRGMv2_0521_4_149 190093 190737 - 2.A.123.4.1
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_150 190734 191465 - GT2
pfam HRGMv2_0521_4 HRGMv2_0521_4_151 191469 192503 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
TC HRGMv2_0521_4 HRGMv2_0521_4_152 192666 193769 - 3.A.1.105.15
TC HRGMv2_0521_4 HRGMv2_0521_4_153 193772 194851 - 3.A.1.105.4
TC HRGMv2_0521_4 HRGMv2_0521_4_154 194855 195595 - 3.A.1.105.4
TC HRGMv2_0521_4 HRGMv2_0521_4_155 195588 196496 - 3.A.1.105.15
TC HRGMv2_0521_4 HRGMv2_0521_4_156 196498 197385 - 3.A.1.105.4
Gene ID: HRGMv2_0521_4_145
Type: CAZyme
Location: 183601 - 185826 (-)
Gene ID: HRGMv2_0521_4_146
Type: pfam
Location: 186044 - 187747 (-)
Gene ID: HRGMv2_0521_4_147
Type: pfam
Location: 187915 - 188295 (-)
Gene ID: HRGMv2_0521_4_148
Type: CAZyme
Location: 188541 - 190106 (-)
Gene ID: HRGMv2_0521_4_149
Type: TC
Location: 190093 - 190737 (-)
Gene ID: HRGMv2_0521_4_150
Type: CAZyme
Location: 190734 - 191465 (-)
Gene ID: HRGMv2_0521_4_151
Type: pfam
Location: 191469 - 192503 (-)
Gene ID: HRGMv2_0521_4_152
Type: TC
Location: 192666 - 193769 (-)
Gene ID: HRGMv2_0521_4_153
Type: TC
Location: 193772 - 194851 (-)
Gene ID: HRGMv2_0521_4_154
Type: TC
Location: 194855 - 195595 (-)
Gene ID: HRGMv2_0521_4_155
Type: TC
Location: 195588 - 196496 (-)
Gene ID: HRGMv2_0521_4_156
Type: TC
Location: 196498 - 197385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0521_4_154 vegetarian > vegan 1.62205 0.00694

🧭 Explore Read Mapping of CGC

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