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Cluster: HRGMv2_0521_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_21 22712 24898 - GH97
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_22 25003 26886 - GH13_46
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_23 26883 28229 - GH13
CAZyme HRGMv2_0521_4 HRGMv2_0521_4_24 28232 30268 - GH13_36
pfam HRGMv2_0521_4 HRGMv2_0521_4_25 30388 32397 - SusE
TC HRGMv2_0521_4 HRGMv2_0521_4_26 32427 34067 - 8.A.46.1.1
TC HRGMv2_0521_4 HRGMv2_0521_4_27 34108 37122 - 1.B.14.6.1
TC HRGMv2_0521_4 HRGMv2_0521_4_28 37185 38495 - 2.A.2.6.3
TC HRGMv2_0521_4 HRGMv2_0521_4_29 38708 40090 + 8.A.59.2.1
Gene ID: HRGMv2_0521_4_21
Type: CAZyme
Location: 22712 - 24898 (-)
Gene ID: HRGMv2_0521_4_22
Type: CAZyme
Location: 25003 - 26886 (-)
Gene ID: HRGMv2_0521_4_23
Type: CAZyme
Location: 26883 - 28229 (-)
Gene ID: HRGMv2_0521_4_24
Type: CAZyme
Location: 28232 - 30268 (-)
Gene ID: HRGMv2_0521_4_25
Type: pfam
Location: 30388 - 32397 (-)
Gene ID: HRGMv2_0521_4_26
Type: TC
Location: 32427 - 34067 (-)
Gene ID: HRGMv2_0521_4_27
Type: TC
Location: 34108 - 37122 (-)
Gene ID: HRGMv2_0521_4_28
Type: TC
Location: 37185 - 38495 (-)
Gene ID: HRGMv2_0521_4_29
Type: TC
Location: 38708 - 40090 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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