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Cluster: HRGMv2_0521_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0521_1 HRGMv2_0521_1_61 63286 64848 + 3.B.1.1.2
NULL(UNKNOWN) HRGMv2_0521_1 HRGMv2_0521_1_62 64868 65191 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0521_1 HRGMv2_0521_1_63 65206 65664 + Biotin_lipoyl | Biotin_lipoyl_2
TC HRGMv2_0521_1 HRGMv2_0521_1_64 65675 66880 + 3.B.1.1.2
TF HRGMv2_0521_1 HRGMv2_0521_1_65 67001 67570 - GerE
STP HRGMv2_0521_1 HRGMv2_0521_1_66 67696 68715 + FecR
TC HRGMv2_0521_1 HRGMv2_0521_1_67 68788 72033 + 1.B.14.6.1
pfam HRGMv2_0521_1 HRGMv2_0521_1_68 72047 73639 + SusD_RagB | SusD-like_3
sulfatase HRGMv2_0521_1 HRGMv2_0521_1_69 73667 75301 + S1_24
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_70 75314 76663 + GH158
NULL(UNKNOWN) HRGMv2_0521_1 HRGMv2_0521_1_71 76683 77954 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_0521_1 HRGMv2_0521_1_72 77951 79951 + S1_24
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_73 79963 82176 + GH3
NULL(UNKNOWN) HRGMv2_0521_1 HRGMv2_0521_1_74 82195 82335 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0521_1 HRGMv2_0521_1_75 82371 84257 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_76 84281 85561 + GH158
STP HRGMv2_0521_1 HRGMv2_0521_1_77 85708 86217 + Sigma70_r2 | Sigma70_r4
NULL(UNKNOWN) HRGMv2_0521_1 HRGMv2_0521_1_78 86214 87422 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0521_1 HRGMv2_0521_1_79 87559 89565 + GH97
Gene ID: HRGMv2_0521_1_61
Type: TC
Location: 63286 - 64848 (+)
Gene ID: HRGMv2_0521_1_62
Type:
Location: 64868 - 65191 (+)
Gene ID: HRGMv2_0521_1_63
Type: pfam
Location: 65206 - 65664 (+)
Gene ID: HRGMv2_0521_1_64
Type: TC
Location: 65675 - 66880 (+)
Gene ID: HRGMv2_0521_1_65
Type: TF
Location: 67001 - 67570 (-)
Gene ID: HRGMv2_0521_1_66
Type: STP
Location: 67696 - 68715 (+)
Gene ID: HRGMv2_0521_1_67
Type: TC
Location: 68788 - 72033 (+)
Gene ID: HRGMv2_0521_1_68
Type: pfam
Location: 72047 - 73639 (+)
Gene ID: HRGMv2_0521_1_69
Type: sulfatase
Location: 73667 - 75301 (+)
Gene ID: HRGMv2_0521_1_70
Type: CAZyme
Location: 75314 - 76663 (+)
Gene ID: HRGMv2_0521_1_71
Type:
Location: 76683 - 77954 (+)
Gene ID: HRGMv2_0521_1_72
Type: sulfatase
Location: 77951 - 79951 (+)
Gene ID: HRGMv2_0521_1_73
Type: CAZyme
Location: 79963 - 82176 (+)
Gene ID: HRGMv2_0521_1_74
Type:
Location: 82195 - 82335 (+)
Gene ID: HRGMv2_0521_1_75
Type:
Location: 82371 - 84257 (+)
Gene ID: HRGMv2_0521_1_76
Type: CAZyme
Location: 84281 - 85561 (+)
Gene ID: HRGMv2_0521_1_77
Type: STP
Location: 85708 - 86217 (+)
Gene ID: HRGMv2_0521_1_78
Type:
Location: 86214 - 87422 (+)
Gene ID: HRGMv2_0521_1_79
Type: CAZyme
Location: 87559 - 89565 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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