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Cluster: HRGMv2_0474_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0474_1 HRGMv2_0474_1_12 16900 18153 - GT30
pfam HRGMv2_0474_1 HRGMv2_0474_1_13 18150 19682 - tRNA-synt_1c | Anticodon_2
CAZyme HRGMv2_0474_1 HRGMv2_0474_1_14 19967 22144 - GH97
NULL(UNKNOWN) HRGMv2_0474_1 HRGMv2_0474_1_15 22353 25040 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0474_1 HRGMv2_0474_1_16 25182 26693 - GH128
CAZyme HRGMv2_0474_1 HRGMv2_0474_1_17 26810 30040 - GH16_3
NULL(UNKNOWN) HRGMv2_0474_1 HRGMv2_0474_1_18 30289 31260 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0474_1 HRGMv2_0474_1_19 31652 34573 + Y_Y_Y
CAZyme HRGMv2_0474_1 HRGMv2_0474_1_20 34907 36262 + GH16_3
CAZyme HRGMv2_0474_1 HRGMv2_0474_1_21 36370 38628 + GH3
TC HRGMv2_0474_1 HRGMv2_0474_1_22 38688 41894 + 1.B.14.6.1
Gene ID: HRGMv2_0474_1_12
Type: CAZyme
Location: 16900 - 18153 (-)
Gene ID: HRGMv2_0474_1_13
Type: pfam
Location: 18150 - 19682 (-)
Gene ID: HRGMv2_0474_1_14
Type: CAZyme
Location: 19967 - 22144 (-)
Gene ID: HRGMv2_0474_1_15
Type:
Location: 22353 - 25040 (-)
Gene ID: HRGMv2_0474_1_16
Type: CAZyme
Location: 25182 - 26693 (-)
Gene ID: HRGMv2_0474_1_17
Type: CAZyme
Location: 26810 - 30040 (-)
Gene ID: HRGMv2_0474_1_18
Type:
Location: 30289 - 31260 (-)
Gene ID: HRGMv2_0474_1_19
Type: STP
Location: 31652 - 34573 (+)
Gene ID: HRGMv2_0474_1_20
Type: CAZyme
Location: 34907 - 36262 (+)
Gene ID: HRGMv2_0474_1_21
Type: CAZyme
Location: 36370 - 38628 (+)
Gene ID: HRGMv2_0474_1_22
Type: TC
Location: 38688 - 41894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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