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Cluster: HRGMv2_0471_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0471_29 HRGMv2_0471_29_42 59422 60471 - 9.B.18.2.1
pfam HRGMv2_0471_29 HRGMv2_0471_29_43 60523 61635 - Acyl_transf_3
CAZyme HRGMv2_0471_29 HRGMv2_0471_29_44 61780 62664 - GT2
CAZyme HRGMv2_0471_29 HRGMv2_0471_29_45 62753 63769 - GT4
pfam HRGMv2_0471_29 HRGMv2_0471_29_46 63754 64518 - Polysacc_deac_1
CAZyme HRGMv2_0471_29 HRGMv2_0471_29_47 64520 65581 - GT4
NULL(UNKNOWN) HRGMv2_0471_29 HRGMv2_0471_29_48 65578 66642 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0471_29 HRGMv2_0471_29_49 66639 67790 - Wzy_C
CAZyme HRGMv2_0471_29 HRGMv2_0471_29_50 67795 69027 - GT4
CAZyme HRGMv2_0471_29 HRGMv2_0471_29_51 69042 70250 - GT4
CAZyme HRGMv2_0471_29 HRGMv2_0471_29_52 70283 71368 - GT4
Gene ID: HRGMv2_0471_29_42
Type: TC
Location: 59422 - 60471 (-)
Gene ID: HRGMv2_0471_29_43
Type: pfam
Location: 60523 - 61635 (-)
Gene ID: HRGMv2_0471_29_44
Type: CAZyme
Location: 61780 - 62664 (-)
Gene ID: HRGMv2_0471_29_45
Type: CAZyme
Location: 62753 - 63769 (-)
Gene ID: HRGMv2_0471_29_46
Type: pfam
Location: 63754 - 64518 (-)
Gene ID: HRGMv2_0471_29_47
Type: CAZyme
Location: 64520 - 65581 (-)
Gene ID: HRGMv2_0471_29_48
Type:
Location: 65578 - 66642 (-)
Gene ID: HRGMv2_0471_29_49
Type: pfam
Location: 66639 - 67790 (-)
Gene ID: HRGMv2_0471_29_50
Type: CAZyme
Location: 67795 - 69027 (-)
Gene ID: HRGMv2_0471_29_51
Type: CAZyme
Location: 69042 - 70250 (-)
Gene ID: HRGMv2_0471_29_52
Type: CAZyme
Location: 70283 - 71368 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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