PROTEIN: HRGMv2_0471_29_48
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0471_29_48.pdb
Genome ID:
Protein ID:
HRGMv2_0471_29_48
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MIKIITNLEE LQKFRDNWNF IYTNTFNSTP FQHFEYLYSS LININKADDN LYIIILWNNI 60 YKQWFAVFPF IKTKKGILKF INVSHSDFCT PLIIPQFNNY NLYEEVAEFL SAQKDIKGLW 120 LENVRPEDSS LSMFKPFFKY SVSYDMNYFS DISIYSTEND RDIIDAFRYV NSTKRKNLRK 180 LMKSMEGIEF KLCNKSDNIP YPAYEINFLI KFMVEKGIRD EEYFSDSMLT FWKDLYENGV 240 LSVALLGDGE NIKSCNLIFY NEKRNEYISW IMLYTDRAWN LNINLKIAEY IYHNGMGTIN 300 FARGIYDYKL VNFHPDVKPL FCVKIAKTKW GHCKNIVSMA AHFSKPIIKT FLRR 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HZ10-F1-model_v4 | 1 | 346 | 1 | 358 | 0.7327 |
0.7909 |
| AF-A0A1D6J7B6-F1-model_v4 | 8 | 346 | 1 | 367 | 0.7175 |
0.8077 |
| AF-K0EML1-F1-model_v4 | 1 | 328 | 4 | 314 | 0.6981 |
0.7715 |
| AF-A0A0R0J9D5-F1-model_v4 | 1 | 346 | 68 | 448 | 0.693 |
0.8192 |
| AF-O80456-F1-model_v4 | 1 | 346 | 82 | 451 | 0.6825 |
0.8087 |
| AF-Q0JCZ2-F1-model_v4 | 1 | 346 | 81 | 450 | 0.6825 |
0.8149 |
| AF-O25065-F1-model_v4 | 5 | 328 | 1 | 290 | 0.68 |
0.7709 |
| AF-Q9HUG2-F1-model_v4 | 1 | 323 | 12 | 298 | 0.6741 |
0.7766 |
| AF-Q8ZMM6-F1-model_v4 | 1 | 326 | 12 | 298 | 0.6448 |
0.7467 |
| AF-Q8CZ30-F1-model_v4 | 1 | 341 | 1 | 291 | 0.5999 |
0.6871 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5K7YHP0-F1-model_v4 | GT4 | 1 | 345 | 348 | 710 | 0.6222 |
0.8565 |
| A0R4V1 | GT2 | 1 | 354 | 306 | 678 | 0.6176 |
0.8251 |
| A0A4U1HM25 | GT4 | 1 | 353 | 352 | 698 | 0.6138 |
0.8348 |
| AF-Q2IPR1-F1-model_v4 | GT4 | 1 | 342 | 347 | 685 | 0.6134 |
0.8497 |
| AF-B8JF70-F1-model_v4 | GT4 | 1 | 329 | 348 | 674 | 0.601 |
0.8616 |
| BDG08718.1 | GT4 | 1 | 329 | 396 | 727 | 0.6001 |
0.877 |
| AF-A4Q9U6-F1-model_v4 | GT4 | 1 | 353 | 389 | 740 | 0.598 |
0.8191 |
| AF-A0A0B6TIX1-F1-model_v4 | GT4 | 1 | 348 | 397 | 743 | 0.5954 |
0.8322 |
| AF-B4UGN4-F1-model_v4 | GT4 | 1 | 329 | 348 | 674 | 0.5945 |
0.8522 |
| AF-Q5KSB3-F1-model_v4 | GT4 | 1 | 353 | 389 | 740 | 0.5943 |
0.8125 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5K7YHP0 | GT4 | 1 | 345 | 348 | 710 | 0.6222 |
0.8565 |
| A0R4V1 | GT2 | 1 | 354 | 306 | 678 | 0.6176 |
0.8251 |
| A0A4U1HM25 | GT4 | 1 | 353 | 352 | 698 | 0.6138 |
0.8348 |
| B8JF70 | GT4 | 1 | 329 | 348 | 674 | 0.601 |
0.8616 |
| BDG08718.1 | GT4 | 1 | 329 | 396 | 727 | 0.6001 |
0.877 |
| A0A0F6WPF6 | GT4 | 1 | 353 | 389 | 740 | 0.5921 |
0.8109 |
| WIM71735.1 | GT4 | 1 | 353 | 388 | 757 | 0.5726 |
0.7986 |
| A0A160T427 | GH13 | 1 | 338 | 20 | 339 | 0.5716 |
0.6413 |
| A0A1Y0CB11 | GT4 | 1 | 349 | 407 | 758 | 0.5294 |
0.7398 |
| A0A6H1RBS1 | GT1 | 1 | 338 | 337 | 644 | 0.5224 |
0.785 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1xe4-assembly1.cif.gz_A | 2 | 339 | 1 | 335 | 0.6884 |
0.7337 |
| 2hqy-assembly1.cif.gz_B | 3 | 327 | 1 | 296 | 0.6878 |
0.7727 |
| 1xix-assembly1.cif.gz_A | 2 | 339 | 1 | 335 | 0.6878 |
0.733 |
| 1xf8-assembly1.cif.gz_A | 2 | 339 | 1 | 335 | 0.6878 |
0.7329 |
| 4v36-assembly2.cif.gz_B | 3 | 342 | 1 | 306 | 0.6864 |
0.7659 |
| 7z6a-assembly1.cif.gz_A | 2 | 338 | 1 | 332 | 0.683 |
0.7316 |
| 4v36-assembly1.cif.gz_A | 3 | 342 | 1 | 315 | 0.6796 |
0.7494 |
| 5vrv-assembly2.cif.gz_D | 10 | 341 | 1 | 302 | 0.6795 |
0.768 |
| 5vrv-assembly3.cif.gz_E | 10 | 341 | 1 | 301 | 0.679 |
0.7707 |
| 5vrv-assembly1.cif.gz_B | 10 | 341 | 1 | 303 | 0.6789 |
0.7661 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9EY50-F1-model_v4 | 1 | 339 | 1 | 336 | 0.6881 |
0.7326 |
| AF-P33275-F1-model_v4 | 5 | 328 | 1 | 308 | 0.6568 |
0.7277 |
| AF-B2GI63-F1-model_v4 | 1 | 325 | 4 | 303 | 0.63 |
0.7088 |
| AF-C7R1N6-F1-model_v4 | 1 | 338 | 4 | 308 | 0.6121 |
0.6922 |
| AF-C9ZFL1-F1-model_v4 | 1 | 338 | 11 | 308 | 0.5972 |
0.6844 |
| AF-B1VS15-F1-model_v4 | 1 | 338 | 11 | 307 | 0.5955 |
0.6834 |
| AF-Q82G40-F1-model_v4 | 1 | 338 | 12 | 308 | 0.5953 |
0.6838 |
| AF-Q9KZV0-F1-model_v4 | 1 | 338 | 12 | 309 | 0.593 |
0.6808 |
| AF-A8LDL3-F1-model_v4 | 1 | 338 | 2 | 322 | 0.5903 |
0.6488 |
| AF-D2B7W7-F1-model_v4 | 1 | 325 | 3 | 337 | 0.5859 |
0.6471 |