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Cluster: HRGMv2_0469_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0469_1 HRGMv2_0469_1_53 81359 82882 + GH5_4
CAZyme HRGMv2_0469_1 HRGMv2_0469_1_54 82913 85849 + GH31_4
CAZyme HRGMv2_0469_1 HRGMv2_0469_1_55 85846 88356 + GH2
CAZyme HRGMv2_0469_1 HRGMv2_0469_1_56 88376 90574 + GH3
pfam HRGMv2_0469_1 HRGMv2_0469_1_57 90812 91795 + Abi_2
pfam HRGMv2_0469_1 HRGMv2_0469_1_58 91937 92410 + C_GCAxxG_C_C
TC HRGMv2_0469_1 HRGMv2_0469_1_59 92429 94420 + 2.A.67.4.2
Gene ID: HRGMv2_0469_1_53
Type: CAZyme
Location: 81359 - 82882 (+)
Gene ID: HRGMv2_0469_1_54
Type: CAZyme
Location: 82913 - 85849 (+)
Gene ID: HRGMv2_0469_1_55
Type: CAZyme
Location: 85846 - 88356 (+)
Gene ID: HRGMv2_0469_1_56
Type: CAZyme
Location: 88376 - 90574 (+)
Gene ID: HRGMv2_0469_1_57
Type: pfam
Location: 90812 - 91795 (+)
Gene ID: HRGMv2_0469_1_58
Type: pfam
Location: 91937 - 92410 (+)
Gene ID: HRGMv2_0469_1_59
Type: TC
Location: 92429 - 94420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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