Cluster: HRGMv2_0469_CGC11
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 11
- Substrate:
- Genome ID: HRGMv2_0469
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_11 | 9184 | 11133 | + | GH133 |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_12 | 11149 | 12417 | + | GT4 |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_13 | 12485 | 13879 | + | GH57 |
| TF | HRGMv2_0469_7 | HRGMv2_0469_7_14 | 14084 | 17962 | + | HTH_AraC |
| pfam | HRGMv2_0469_7 | HRGMv2_0469_7_15 | 18213 | 18803 | + | tRNA_edit |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_16 | 18907 | 21492 | - | GH3 |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_17 | 21489 | 23579 | - | PL1_2 |
| pfam | HRGMv2_0469_7 | HRGMv2_0469_7_18 | 23823 | 25481 | - | DUF4957 | DUF5123 |
| TC | HRGMv2_0469_7 | HRGMv2_0469_7_19 | 25494 | 27677 | - | 8.A.46.1.3 |
| TC | HRGMv2_0469_7 | HRGMv2_0469_7_20 | 27713 | 30973 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | HRGMv2_0469_7 | HRGMv2_0469_7_21 | 32197 | 32910 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0469_7 | HRGMv2_0469_7_22 | 32992 | 34536 | - | PDDEXK_9 | AAA-ATPase_like |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_23 | 34762 | 39252 | - | CE8 |
| NULL(UNKNOWN) | HRGMv2_0469_7 | HRGMv2_0469_7_24 | 39379 | 39513 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_25 | 39510 | 41312 | - | PL1_2 |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_26 | 41408 | 43054 | - | PL1_2 |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_27 | 43300 | 48057 | - | GH105 | GH28 |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_28 | 48462 | 50498 | - | GH127 |
| pfam | HRGMv2_0469_7 | HRGMv2_0469_7_29 | 50955 | 51350 | + | GtrA_DPMS_TM |
| CAZyme | HRGMv2_0469_7 | HRGMv2_0469_7_30 | 51347 | 52279 | + | GT2 |
Gene ID: HRGMv2_0469_7_11
Type: CAZyme
Location: 9184 - 11133 (+)
Type: CAZyme
Location: 9184 - 11133 (+)
Gene ID: HRGMv2_0469_7_12
Type: CAZyme
Location: 11149 - 12417 (+)
Type: CAZyme
Location: 11149 - 12417 (+)
Gene ID: HRGMv2_0469_7_13
Type: CAZyme
Location: 12485 - 13879 (+)
Type: CAZyme
Location: 12485 - 13879 (+)
Gene ID: HRGMv2_0469_7_14
Type: TF
Location: 14084 - 17962 (+)
Type: TF
Location: 14084 - 17962 (+)
Gene ID: HRGMv2_0469_7_15
Type: pfam
Location: 18213 - 18803 (+)
Type: pfam
Location: 18213 - 18803 (+)
Gene ID: HRGMv2_0469_7_16
Type: CAZyme
Location: 18907 - 21492 (-)
Type: CAZyme
Location: 18907 - 21492 (-)
Gene ID: HRGMv2_0469_7_17
Type: CAZyme
Location: 21489 - 23579 (-)
Type: CAZyme
Location: 21489 - 23579 (-)
Gene ID: HRGMv2_0469_7_18
Type: pfam
Location: 23823 - 25481 (-)
Type: pfam
Location: 23823 - 25481 (-)
Gene ID: HRGMv2_0469_7_19
Type: TC
Location: 25494 - 27677 (-)
Type: TC
Location: 25494 - 27677 (-)
Gene ID: HRGMv2_0469_7_20
Type: TC
Location: 27713 - 30973 (-)
Type: TC
Location: 27713 - 30973 (-)
Gene ID: HRGMv2_0469_7_21
Type:
Location: 32197 - 32910 (+)
Type:
Location: 32197 - 32910 (+)
Gene ID: HRGMv2_0469_7_22
Type: pfam
Location: 32992 - 34536 (-)
Type: pfam
Location: 32992 - 34536 (-)
Gene ID: HRGMv2_0469_7_23
Type: CAZyme
Location: 34762 - 39252 (-)
Type: CAZyme
Location: 34762 - 39252 (-)
Gene ID: HRGMv2_0469_7_24
Type:
Location: 39379 - 39513 (-)
Type:
Location: 39379 - 39513 (-)
Gene ID: HRGMv2_0469_7_25
Type: CAZyme
Location: 39510 - 41312 (-)
Type: CAZyme
Location: 39510 - 41312 (-)
Gene ID: HRGMv2_0469_7_26
Type: CAZyme
Location: 41408 - 43054 (-)
Type: CAZyme
Location: 41408 - 43054 (-)
Gene ID: HRGMv2_0469_7_27
Type: CAZyme
Location: 43300 - 48057 (-)
Type: CAZyme
Location: 43300 - 48057 (-)
Gene ID: HRGMv2_0469_7_28
Type: CAZyme
Location: 48462 - 50498 (-)
Type: CAZyme
Location: 48462 - 50498 (-)
Gene ID: HRGMv2_0469_7_29
Type: pfam
Location: 50955 - 51350 (+)
Type: pfam
Location: 50955 - 51350 (+)
Gene ID: HRGMv2_0469_7_30
Type: CAZyme
Location: 51347 - 52279 (+)
Type: CAZyme
Location: 51347 - 52279 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900549175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.