Cluster: HRGMv2_0436_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0436
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0436_44 | HRGMv2_0436_44_60 | 65599 | 66345 | + | GT2 |
| pfam | HRGMv2_0436_44 | HRGMv2_0436_44_61 | 66429 | 67748 | + | SUFU |
| TC | HRGMv2_0436_44 | HRGMv2_0436_44_62 | 68194 | 69408 | - | 2.A.40.1.4 |
| TC | HRGMv2_0436_44 | HRGMv2_0436_44_63 | 69519 | 70532 | - | 3.A.1.13.2 |
| STP | HRGMv2_0436_44 | HRGMv2_0436_44_64 | 70556 | 71674 | - | Peripla_BP_2 |
| TC | HRGMv2_0436_44 | HRGMv2_0436_44_65 | 71806 | 73272 | + | 2.A.47.1.1 |
| TC | HRGMv2_0436_44 | HRGMv2_0436_44_66 | 73582 | 74883 | - | 2.A.40.7.4 |
Gene ID: HRGMv2_0436_44_60
Type: CAZyme
Location: 65599 - 66345 (+)
Type: CAZyme
Location: 65599 - 66345 (+)
Gene ID: HRGMv2_0436_44_61
Type: pfam
Location: 66429 - 67748 (+)
Type: pfam
Location: 66429 - 67748 (+)
Gene ID: HRGMv2_0436_44_62
Type: TC
Location: 68194 - 69408 (-)
Type: TC
Location: 68194 - 69408 (-)
Gene ID: HRGMv2_0436_44_63
Type: TC
Location: 69519 - 70532 (-)
Type: TC
Location: 69519 - 70532 (-)
Gene ID: HRGMv2_0436_44_64
Type: STP
Location: 70556 - 71674 (-)
Type: STP
Location: 70556 - 71674 (-)
Gene ID: HRGMv2_0436_44_65
Type: TC
Location: 71806 - 73272 (+)
Type: TC
Location: 71806 - 73272 (+)
Gene ID: HRGMv2_0436_44_66
Type: TC
Location: 73582 - 74883 (-)
Type: TC
Location: 73582 - 74883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella intermedia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.