Cluster: HRGMv2_0434_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0434
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0434_14 | HRGMv2_0434_14_41 | 43506 | 44549 | - | GH43_5 |
| CAZyme | HRGMv2_0434_14 | HRGMv2_0434_14_42 | 44558 | 47221 | - | GH43_4 |
| NULL(UNKNOWN) | HRGMv2_0434_14 | HRGMv2_0434_14_43 | 47328 | 49094 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0434_14 | HRGMv2_0434_14_44 | 49160 | 50914 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0434_14 | HRGMv2_0434_14_45 | 50951 | 54163 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0434_14_41
Type: CAZyme
Location: 43506 - 44549 (-)
Type: CAZyme
Location: 43506 - 44549 (-)
Gene ID: HRGMv2_0434_14_42
Type: CAZyme
Location: 44558 - 47221 (-)
Type: CAZyme
Location: 44558 - 47221 (-)
Gene ID: HRGMv2_0434_14_43
Type:
Location: 47328 - 49094 (-)
Type:
Location: 47328 - 49094 (-)
Gene ID: HRGMv2_0434_14_44
Type: pfam
Location: 49160 - 50914 (-)
Type: pfam
Location: 49160 - 50914 (-)
Gene ID: HRGMv2_0434_14_45
Type: TC
Location: 50951 - 54163 (-)
Type: TC
Location: 50951 - 54163 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp017623335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.