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Cluster: HRGMv2_0434_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_22 26757 28814 + GH5_21
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_23 28962 31406 + GH95
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_24 31413 33344 + GH97
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_25 33351 35789 + GH146
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_26 35814 37487 + CBM91 | GH43_12
pfam HRGMv2_0434_12 HRGMv2_0434_12_27 37765 38460 - GPDPase_memb
pfam HRGMv2_0434_12 HRGMv2_0434_12_28 38472 38810 - DUF2752
TC HRGMv2_0434_12 HRGMv2_0434_12_29 38944 40755 + 4.C.1.1.14
Gene ID: HRGMv2_0434_12_22
Type: CAZyme
Location: 26757 - 28814 (+)
Gene ID: HRGMv2_0434_12_23
Type: CAZyme
Location: 28962 - 31406 (+)
Gene ID: HRGMv2_0434_12_24
Type: CAZyme
Location: 31413 - 33344 (+)
Gene ID: HRGMv2_0434_12_25
Type: CAZyme
Location: 33351 - 35789 (+)
Gene ID: HRGMv2_0434_12_26
Type: CAZyme
Location: 35814 - 37487 (+)
Gene ID: HRGMv2_0434_12_27
Type: pfam
Location: 37765 - 38460 (-)
Gene ID: HRGMv2_0434_12_28
Type: pfam
Location: 38472 - 38810 (-)
Gene ID: HRGMv2_0434_12_29
Type: TC
Location: 38944 - 40755 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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