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Cluster: HRGMv2_0434_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0434_7 HRGMv2_0434_7_19 41408 43834 + GH127
CAZyme HRGMv2_0434_7 HRGMv2_0434_7_20 43862 45814 + GH97
TF HRGMv2_0434_7 HRGMv2_0434_7_21 45815 49798 + HTH_AraC
CAZyme HRGMv2_0434_7 HRGMv2_0434_7_22 49820 52693 + CBM32 | GH43_34
pfam HRGMv2_0434_7 HRGMv2_0434_7_23 52657 54405 - PDDEXK_9 | AAA-ATPase_like
NULL(UNKNOWN) HRGMv2_0434_7 HRGMv2_0434_7_24 54431 54595 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0434_7 HRGMv2_0434_7_25 54704 55279 - 9.B.18.1.3
TC HRGMv2_0434_7 HRGMv2_0434_7_26 55276 56412 - 9.B.146.1.4
CAZyme HRGMv2_0434_7 HRGMv2_0434_7_27 56574 57374 - GT2
Gene ID: HRGMv2_0434_7_19
Type: CAZyme
Location: 41408 - 43834 (+)
Gene ID: HRGMv2_0434_7_20
Type: CAZyme
Location: 43862 - 45814 (+)
Gene ID: HRGMv2_0434_7_21
Type: TF
Location: 45815 - 49798 (+)
Gene ID: HRGMv2_0434_7_22
Type: CAZyme
Location: 49820 - 52693 (+)
Gene ID: HRGMv2_0434_7_23
Type: pfam
Location: 52657 - 54405 (-)
Gene ID: HRGMv2_0434_7_24
Type:
Location: 54431 - 54595 (-)
Gene ID: HRGMv2_0434_7_25
Type: TC
Location: 54704 - 55279 (-)
Gene ID: HRGMv2_0434_7_26
Type: TC
Location: 55276 - 56412 (-)
Gene ID: HRGMv2_0434_7_27
Type: CAZyme
Location: 56574 - 57374 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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