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Cluster: HRGMv2_0431_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0431_52 HRGMv2_0431_52_12 15874 16920 - GT4
CAZyme HRGMv2_0431_52 HRGMv2_0431_52_13 16957 17874 - GT2
CAZyme HRGMv2_0431_52 HRGMv2_0431_52_14 17884 18822 - GT2
pfam HRGMv2_0431_52 HRGMv2_0431_52_15 18832 19899 - Glyco_tran_WbsX
CAZyme HRGMv2_0431_52 HRGMv2_0431_52_16 19943 21085 - GT4
pfam HRGMv2_0431_52 HRGMv2_0431_52_17 21128 22690 - PDDEXK_9 | AAA-ATPase_like
NULL(UNKNOWN) HRGMv2_0431_52 HRGMv2_0431_52_18 22795 24261 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0431_52 HRGMv2_0431_52_19 24350 26434 - 8.A.3.3.2
Gene ID: HRGMv2_0431_52_12
Type: CAZyme
Location: 15874 - 16920 (-)
Gene ID: HRGMv2_0431_52_13
Type: CAZyme
Location: 16957 - 17874 (-)
Gene ID: HRGMv2_0431_52_14
Type: CAZyme
Location: 17884 - 18822 (-)
Gene ID: HRGMv2_0431_52_15
Type: pfam
Location: 18832 - 19899 (-)
Gene ID: HRGMv2_0431_52_16
Type: CAZyme
Location: 19943 - 21085 (-)
Gene ID: HRGMv2_0431_52_17
Type: pfam
Location: 21128 - 22690 (-)
Gene ID: HRGMv2_0431_52_18
Type:
Location: 22795 - 24261 (-)
Gene ID: HRGMv2_0431_52_19
Type: TC
Location: 24350 - 26434 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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