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Cluster: HRGMv2_0431_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0431_102 HRGMv2_0431_102_42 42072 43727 + GH20
pfam HRGMv2_0431_102 HRGMv2_0431_102_43 44080 46107 - Helicase_C | UVR | ResIII | UvrB | UvrB_inter
pfam HRGMv2_0431_102 HRGMv2_0431_102_44 46286 48535 - PHO4
TC HRGMv2_0431_102 HRGMv2_0431_102_45 48731 51376 - 9.A.8.1.6
CAZyme HRGMv2_0431_102 HRGMv2_0431_102_46 51756 55646 + GT2
pfam HRGMv2_0431_102 HRGMv2_0431_102_47 55766 56062 + YgbA_NO
peptidase HRGMv2_0431_102 HRGMv2_0431_102_48 56306 57976 - C44.UNW
CAZyme HRGMv2_0431_102 HRGMv2_0431_102_49 58280 59539 - GH23
Gene ID: HRGMv2_0431_102_42
Type: CAZyme
Location: 42072 - 43727 (+)
Gene ID: HRGMv2_0431_102_43
Type: pfam
Location: 44080 - 46107 (-)
Gene ID: HRGMv2_0431_102_44
Type: pfam
Location: 46286 - 48535 (-)
Gene ID: HRGMv2_0431_102_45
Type: TC
Location: 48731 - 51376 (-)
Gene ID: HRGMv2_0431_102_46
Type: CAZyme
Location: 51756 - 55646 (+)
Gene ID: HRGMv2_0431_102_47
Type: pfam
Location: 55766 - 56062 (+)
Gene ID: HRGMv2_0431_102_48
Type: peptidase
Location: 56306 - 57976 (-)
Gene ID: HRGMv2_0431_102_49
Type: CAZyme
Location: 58280 - 59539 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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