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Cluster: HRGMv2_0430_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0430_2 HRGMv2_0430_2_41 47421 48653 + 9.B.156.3.1
pfam HRGMv2_0430_2 HRGMv2_0430_2_42 48710 50215 + Polysacc_synt
peptidase HRGMv2_0430_2 HRGMv2_0430_2_43 50257 51513 + M16.UPB
TC HRGMv2_0430_2 HRGMv2_0430_2_44 51651 52307 - 3.A.1.15.5
pfam HRGMv2_0430_2 HRGMv2_0430_2_45 52304 53155 - ZnuA
TC HRGMv2_0430_2 HRGMv2_0430_2_46 53169 53618 - 9.B.27.3.1
NULL(UNKNOWN) HRGMv2_0430_2 HRGMv2_0430_2_47 53654 54592 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0430_2 HRGMv2_0430_2_48 54763 56028 - GARS_A | GARS_C | GARS_N
CAZyme HRGMv2_0430_2 HRGMv2_0430_2_49 56192 58519 + GH20
Gene ID: HRGMv2_0430_2_41
Type: TC
Location: 47421 - 48653 (+)
Gene ID: HRGMv2_0430_2_42
Type: pfam
Location: 48710 - 50215 (+)
Gene ID: HRGMv2_0430_2_43
Type: peptidase
Location: 50257 - 51513 (+)
Gene ID: HRGMv2_0430_2_44
Type: TC
Location: 51651 - 52307 (-)
Gene ID: HRGMv2_0430_2_45
Type: pfam
Location: 52304 - 53155 (-)
Gene ID: HRGMv2_0430_2_46
Type: TC
Location: 53169 - 53618 (-)
Gene ID: HRGMv2_0430_2_47
Type:
Location: 53654 - 54592 (-)
Gene ID: HRGMv2_0430_2_48
Type: pfam
Location: 54763 - 56028 (-)
Gene ID: HRGMv2_0430_2_49
Type: CAZyme
Location: 56192 - 58519 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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