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Cluster: HRGMv2_0430_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0430_1 HRGMv2_0430_1_56 68146 69411 + GH23
peptidase HRGMv2_0430_1 HRGMv2_0430_1_57 69456 70754 + M18.UPW
peptidase HRGMv2_0430_1 HRGMv2_0430_1_58 71068 72741 + C44.UNW
TC HRGMv2_0430_1 HRGMv2_0430_1_59 73063 75597 + 3.A.9.1.2
pfam HRGMv2_0430_1 HRGMv2_0430_1_60 75694 76245 + dTDP_sugar_isom
sulfatase HRGMv2_0430_1 HRGMv2_0430_1_61 76309 78090 + S1_97
TC HRGMv2_0430_1 HRGMv2_0430_1_62 78106 78801 + 3.A.1.140.1
Gene ID: HRGMv2_0430_1_56
Type: CAZyme
Location: 68146 - 69411 (+)
Gene ID: HRGMv2_0430_1_57
Type: peptidase
Location: 69456 - 70754 (+)
Gene ID: HRGMv2_0430_1_58
Type: peptidase
Location: 71068 - 72741 (+)
Gene ID: HRGMv2_0430_1_59
Type: TC
Location: 73063 - 75597 (+)
Gene ID: HRGMv2_0430_1_60
Type: pfam
Location: 75694 - 76245 (+)
Gene ID: HRGMv2_0430_1_61
Type: sulfatase
Location: 76309 - 78090 (+)
Gene ID: HRGMv2_0430_1_62
Type: TC
Location: 78106 - 78801 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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