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Cluster: HRGMv2_0429_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0429_6 HRGMv2_0429_6_100 101263 101853 - 4.B.1.1.4
TC HRGMv2_0429_6 HRGMv2_0429_6_101 101866 104226 - 1.B.14.14.1
TC HRGMv2_0429_6 HRGMv2_0429_6_102 104558 107218 + 1.B.14.6.1
TC HRGMv2_0429_6 HRGMv2_0429_6_103 107232 108917 + 8.A.46.1.4
pfam HRGMv2_0429_6 HRGMv2_0429_6_104 108930 109775 + DUF3298
NULL(UNKNOWN) HRGMv2_0429_6 HRGMv2_0429_6_105 109948 110358 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0429_6 HRGMv2_0429_6_106 110391 112853 - GH94
Gene ID: HRGMv2_0429_6_100
Type: TC
Location: 101263 - 101853 (-)
Gene ID: HRGMv2_0429_6_101
Type: TC
Location: 101866 - 104226 (-)
Gene ID: HRGMv2_0429_6_102
Type: TC
Location: 104558 - 107218 (+)
Gene ID: HRGMv2_0429_6_103
Type: TC
Location: 107232 - 108917 (+)
Gene ID: HRGMv2_0429_6_104
Type: pfam
Location: 108930 - 109775 (+)
Gene ID: HRGMv2_0429_6_105
Type:
Location: 109948 - 110358 (-)
Gene ID: HRGMv2_0429_6_106
Type: CAZyme
Location: 110391 - 112853 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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