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Cluster: HRGMv2_0426_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0426_38 HRGMv2_0426_38_18 13604 14098 + 9.B.124.1.6
TC HRGMv2_0426_38 HRGMv2_0426_38_19 14098 15249 + 3.A.1.13.2
TC HRGMv2_0426_38 HRGMv2_0426_38_20 15246 16262 + 3.A.1.13.2
TC HRGMv2_0426_38 HRGMv2_0426_38_21 16259 17014 + 3.A.1.13.2
TC HRGMv2_0426_38 HRGMv2_0426_38_22 17011 18414 + 2.A.25.1.5
pfam HRGMv2_0426_38 HRGMv2_0426_38_23 18405 19853 + GHL10
CAZyme HRGMv2_0426_38 HRGMv2_0426_38_24 19850 20794 + GT2
Gene ID: HRGMv2_0426_38_18
Type: TC
Location: 13604 - 14098 (+)
Gene ID: HRGMv2_0426_38_19
Type: TC
Location: 14098 - 15249 (+)
Gene ID: HRGMv2_0426_38_20
Type: TC
Location: 15246 - 16262 (+)
Gene ID: HRGMv2_0426_38_21
Type: TC
Location: 16259 - 17014 (+)
Gene ID: HRGMv2_0426_38_22
Type: TC
Location: 17011 - 18414 (+)
Gene ID: HRGMv2_0426_38_23
Type: pfam
Location: 18405 - 19853 (+)
Gene ID: HRGMv2_0426_38_24
Type: CAZyme
Location: 19850 - 20794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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