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Cluster: HRGMv2_0426_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0426_32 HRGMv2_0426_32_7 5289 6701 + 2.A.66.2.23
pfam HRGMv2_0426_32 HRGMv2_0426_32_8 6705 8141 + O-ag_pol_Wzy
CAZyme HRGMv2_0426_32 HRGMv2_0426_32_9 8110 9186 + GT4
pfam HRGMv2_0426_32 HRGMv2_0426_32_10 9201 10283 + Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_4
CAZyme HRGMv2_0426_32 HRGMv2_0426_32_11 10308 11129 + GT2
pfam HRGMv2_0426_32 HRGMv2_0426_32_12 11126 11920 + LicD
CAZyme HRGMv2_0426_32 HRGMv2_0426_32_13 11922 13271 + GH109
pfam HRGMv2_0426_32 HRGMv2_0426_32_14 13268 13963 + adh_short | KR | adh_short_C2
TC HRGMv2_0426_32 HRGMv2_0426_32_15 14060 14641 + 9.B.18.1.2
Gene ID: HRGMv2_0426_32_7
Type: TC
Location: 5289 - 6701 (+)
Gene ID: HRGMv2_0426_32_8
Type: pfam
Location: 6705 - 8141 (+)
Gene ID: HRGMv2_0426_32_9
Type: CAZyme
Location: 8110 - 9186 (+)
Gene ID: HRGMv2_0426_32_10
Type: pfam
Location: 9201 - 10283 (+)
Gene ID: HRGMv2_0426_32_11
Type: CAZyme
Location: 10308 - 11129 (+)
Gene ID: HRGMv2_0426_32_12
Type: pfam
Location: 11126 - 11920 (+)
Gene ID: HRGMv2_0426_32_13
Type: CAZyme
Location: 11922 - 13271 (+)
Gene ID: HRGMv2_0426_32_14
Type: pfam
Location: 13268 - 13963 (+)
Gene ID: HRGMv2_0426_32_15
Type: TC
Location: 14060 - 14641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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