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Cluster: HRGMv2_0426_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0426_24 HRGMv2_0426_24_20 20169 22319 - GH106
pfam HRGMv2_0426_24 HRGMv2_0426_24_21 22316 23737 - Arabinose_Iso_C
CAZyme HRGMv2_0426_24 HRGMv2_0426_24_22 23737 26826 - GH106
pfam HRGMv2_0426_24 HRGMv2_0426_24_23 27002 28561 + Metallophos | 5_nucleotid_C
CAZyme HRGMv2_0426_24 HRGMv2_0426_24_24 28660 31647 + GH3
pfam HRGMv2_0426_24 HRGMv2_0426_24_25 31707 32648 + LPG_synthase_C
pfam HRGMv2_0426_24 HRGMv2_0426_24_26 32733 33977 + DUF1015
CAZyme HRGMv2_0426_24 HRGMv2_0426_24_27 34027 35001 - GT2
CAZyme HRGMv2_0426_24 HRGMv2_0426_24_28 35030 36058 - GT2
pfam HRGMv2_0426_24 HRGMv2_0426_24_29 36077 37201 - GLF | NAD_binding_8
TC HRGMv2_0426_24 HRGMv2_0426_24_30 37198 38646 - 2.A.66.2.16
Gene ID: HRGMv2_0426_24_20
Type: CAZyme
Location: 20169 - 22319 (-)
Gene ID: HRGMv2_0426_24_21
Type: pfam
Location: 22316 - 23737 (-)
Gene ID: HRGMv2_0426_24_22
Type: CAZyme
Location: 23737 - 26826 (-)
Gene ID: HRGMv2_0426_24_23
Type: pfam
Location: 27002 - 28561 (+)
Gene ID: HRGMv2_0426_24_24
Type: CAZyme
Location: 28660 - 31647 (+)
Gene ID: HRGMv2_0426_24_25
Type: pfam
Location: 31707 - 32648 (+)
Gene ID: HRGMv2_0426_24_26
Type: pfam
Location: 32733 - 33977 (+)
Gene ID: HRGMv2_0426_24_27
Type: CAZyme
Location: 34027 - 35001 (-)
Gene ID: HRGMv2_0426_24_28
Type: CAZyme
Location: 35030 - 36058 (-)
Gene ID: HRGMv2_0426_24_29
Type: pfam
Location: 36077 - 37201 (-)
Gene ID: HRGMv2_0426_24_30
Type: TC
Location: 37198 - 38646 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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