dbCAN Logo

Cluster: HRGMv2_0426_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0426_1 HRGMv2_0426_1_184 214650 214985 + 3.A.5.1.1
NULL(UNKNOWN) HRGMv2_0426_1 HRGMv2_0426_1_185 215054 215998 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0426_1 HRGMv2_0426_1_186 215995 216576 + CoaE
CAZyme HRGMv2_0426_1 HRGMv2_0426_1_187 216586 218757 + GH92
pfam HRGMv2_0426_1 HRGMv2_0426_1_188 218770 219342 + Hexapep | Mac | Hexapep_2 | Hexapep_2
pfam HRGMv2_0426_1 HRGMv2_0426_1_189 219435 220463 + Hexapep | Hexapep | Hexapep | LpxD | Hexapep_2
CAZyme HRGMv2_0426_1 HRGMv2_0426_1_190 220491 221873 + CE11
pfam HRGMv2_0426_1 HRGMv2_0426_1_191 221892 222665 + Hexapep | Hexapep | Acetyltransf_11
pfam HRGMv2_0426_1 HRGMv2_0426_1_192 223205 223666 + DUF695
CAZyme HRGMv2_0426_1 HRGMv2_0426_1_193 223688 224668 + GH43_17
Gene ID: HRGMv2_0426_1_184
Type: TC
Location: 214650 - 214985 (+)
Gene ID: HRGMv2_0426_1_185
Type:
Location: 215054 - 215998 (+)
Gene ID: HRGMv2_0426_1_186
Type: pfam
Location: 215995 - 216576 (+)
Gene ID: HRGMv2_0426_1_187
Type: CAZyme
Location: 216586 - 218757 (+)
Gene ID: HRGMv2_0426_1_188
Type: pfam
Location: 218770 - 219342 (+)
Gene ID: HRGMv2_0426_1_189
Type: pfam
Location: 219435 - 220463 (+)
Gene ID: HRGMv2_0426_1_190
Type: CAZyme
Location: 220491 - 221873 (+)
Gene ID: HRGMv2_0426_1_191
Type: pfam
Location: 221892 - 222665 (+)
Gene ID: HRGMv2_0426_1_192
Type: pfam
Location: 223205 - 223666 (+)
Gene ID: HRGMv2_0426_1_193
Type: CAZyme
Location: 223688 - 224668 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List