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Cluster: HRGMv2_0426_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0426_19 HRGMv2_0426_19_7 6722 8773 + GH127
pfam HRGMv2_0426_19 HRGMv2_0426_19_8 9086 9358 - MtN3_slv | PQ-loop
pfam HRGMv2_0426_19 HRGMv2_0426_19_9 9502 10641 - OmpA
TC HRGMv2_0426_19 HRGMv2_0426_19_10 11150 12727 - 2.A.17.1.3
pfam HRGMv2_0426_19 HRGMv2_0426_19_11 12968 13858 + Fic
STP HRGMv2_0426_19 HRGMv2_0426_19_12 14069 14716 + TPR_1
TC HRGMv2_0426_19 HRGMv2_0426_19_13 14799 16148 + 2.A.66.1.32
Gene ID: HRGMv2_0426_19_7
Type: CAZyme
Location: 6722 - 8773 (+)
Gene ID: HRGMv2_0426_19_8
Type: pfam
Location: 9086 - 9358 (-)
Gene ID: HRGMv2_0426_19_9
Type: pfam
Location: 9502 - 10641 (-)
Gene ID: HRGMv2_0426_19_10
Type: TC
Location: 11150 - 12727 (-)
Gene ID: HRGMv2_0426_19_11
Type: pfam
Location: 12968 - 13858 (+)
Gene ID: HRGMv2_0426_19_12
Type: STP
Location: 14069 - 14716 (+)
Gene ID: HRGMv2_0426_19_13
Type: TC
Location: 14799 - 16148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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