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Cluster: HRGMv2_0426_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0426_2 HRGMv2_0426_2_135 201531 203090 + 2.A.3.7.3
CAZyme HRGMv2_0426_2 HRGMv2_0426_2_136 203227 205647 + GH78
NULL(UNKNOWN) HRGMv2_0426_2 HRGMv2_0426_2_137 205627 206334 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0426_2 HRGMv2_0426_2_138 206339 208000 - PRK
CAZyme HRGMv2_0426_2 HRGMv2_0426_2_139 208132 208956 - GT2
pfam HRGMv2_0426_2 HRGMv2_0426_2_140 208953 209702 - Kdo
CAZyme HRGMv2_0426_2 HRGMv2_0426_2_141 209674 210759 - GT4
CAZyme HRGMv2_0426_2 HRGMv2_0426_2_142 210981 211736 - GT2
Gene ID: HRGMv2_0426_2_135
Type: TC
Location: 201531 - 203090 (+)
Gene ID: HRGMv2_0426_2_136
Type: CAZyme
Location: 203227 - 205647 (+)
Gene ID: HRGMv2_0426_2_137
Type:
Location: 205627 - 206334 (-)
Gene ID: HRGMv2_0426_2_138
Type: pfam
Location: 206339 - 208000 (-)
Gene ID: HRGMv2_0426_2_139
Type: CAZyme
Location: 208132 - 208956 (-)
Gene ID: HRGMv2_0426_2_140
Type: pfam
Location: 208953 - 209702 (-)
Gene ID: HRGMv2_0426_2_141
Type: CAZyme
Location: 209674 - 210759 (-)
Gene ID: HRGMv2_0426_2_142
Type: CAZyme
Location: 210981 - 211736 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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