Cluster: HRGMv2_0424_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0424
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0424_3 | HRGMv2_0424_3_63 | 75066 | 76076 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_0424_3 | HRGMv2_0424_3_64 | 76264 | 76938 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0424_3 | HRGMv2_0424_3_65 | 77338 | 78705 | + | 2.A.66.1.32 |
| pfam | HRGMv2_0424_3 | HRGMv2_0424_3_66 | 78710 | 79093 | + | GtrA_DPMS_TM |
| TC | HRGMv2_0424_3 | HRGMv2_0424_3_67 | 79107 | 82004 | - | 1.C.105.2.12 |
| TC | HRGMv2_0424_3 | HRGMv2_0424_3_68 | 82117 | 83946 | + | 3.A.1.106.1 |
Gene ID: HRGMv2_0424_3_63
Type: CAZyme
Location: 75066 - 76076 (+)
Type: CAZyme
Location: 75066 - 76076 (+)
Gene ID: HRGMv2_0424_3_64
Type:
Location: 76264 - 76938 (+)
Type:
Location: 76264 - 76938 (+)
Gene ID: HRGMv2_0424_3_65
Type: TC
Location: 77338 - 78705 (+)
Type: TC
Location: 77338 - 78705 (+)
Gene ID: HRGMv2_0424_3_66
Type: pfam
Location: 78710 - 79093 (+)
Type: pfam
Location: 78710 - 79093 (+)
Gene ID: HRGMv2_0424_3_67
Type: TC
Location: 79107 - 82004 (-)
Type: TC
Location: 79107 - 82004 (-)
Gene ID: HRGMv2_0424_3_68
Type: TC
Location: 82117 - 83946 (+)
Type: TC
Location: 82117 - 83946 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.