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Cluster: HRGMv2_0420_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0420_1 HRGMv2_0420_1_96 114945 116333 + 9.B.145.1.2
sulfatase HRGMv2_0420_1 HRGMv2_0420_1_97 116362 117729 + S1_4
TC HRGMv2_0420_1 HRGMv2_0420_1_98 118039 118977 + 2.A.4.7.2
TC HRGMv2_0420_1 HRGMv2_0420_1_99 119127 120107 - 2.A.19.5.2
pfam HRGMv2_0420_1 HRGMv2_0420_1_100 120124 122970 - UvrA_DNA-bind | UvrA_inter
peptidase HRGMv2_0420_1 HRGMv2_0420_1_101 123115 123732 - C40.UPW
CAZyme HRGMv2_0420_1 HRGMv2_0420_1_102 123997 125433 + GH13_28
pfam HRGMv2_0420_1 HRGMv2_0420_1_103 125519 125791 + Cpn10
pfam HRGMv2_0420_1 HRGMv2_0420_1_104 125834 127471 + Cpn60_TCP1
TC HRGMv2_0420_1 HRGMv2_0420_1_105 127584 129551 + 3.A.1.121.4
peptidase HRGMv2_0420_1 HRGMv2_0420_1_106 129560 131533 + M13.UPW
pfam HRGMv2_0420_1 HRGMv2_0420_1_107 131555 132334 + Shikimate_dh_N
TC HRGMv2_0420_1 HRGMv2_0420_1_108 132364 134289 + 3.A.11.1.1
NULL(UNKNOWN) HRGMv2_0420_1 HRGMv2_0420_1_109 134361 135221 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0420_1 HRGMv2_0420_1_110 135336 136175 - 8.A.5.1.6
TC HRGMv2_0420_1 HRGMv2_0420_1_111 136777 137814 + 9.A.40.2.4
pfam HRGMv2_0420_1 HRGMv2_0420_1_112 137985 138353 + DUF488 | DUF488-N3a | DUF488-N3i
CAZyme HRGMv2_0420_1 HRGMv2_0420_1_113 138316 140034 - GH13_19
Gene ID: HRGMv2_0420_1_96
Type: TC
Location: 114945 - 116333 (+)
Gene ID: HRGMv2_0420_1_97
Type: sulfatase
Location: 116362 - 117729 (+)
Gene ID: HRGMv2_0420_1_98
Type: TC
Location: 118039 - 118977 (+)
Gene ID: HRGMv2_0420_1_99
Type: TC
Location: 119127 - 120107 (-)
Gene ID: HRGMv2_0420_1_100
Type: pfam
Location: 120124 - 122970 (-)
Gene ID: HRGMv2_0420_1_101
Type: peptidase
Location: 123115 - 123732 (-)
Gene ID: HRGMv2_0420_1_102
Type: CAZyme
Location: 123997 - 125433 (+)
Gene ID: HRGMv2_0420_1_103
Type: pfam
Location: 125519 - 125791 (+)
Gene ID: HRGMv2_0420_1_104
Type: pfam
Location: 125834 - 127471 (+)
Gene ID: HRGMv2_0420_1_105
Type: TC
Location: 127584 - 129551 (+)
Gene ID: HRGMv2_0420_1_106
Type: peptidase
Location: 129560 - 131533 (+)
Gene ID: HRGMv2_0420_1_107
Type: pfam
Location: 131555 - 132334 (+)
Gene ID: HRGMv2_0420_1_108
Type: TC
Location: 132364 - 134289 (+)
Gene ID: HRGMv2_0420_1_109
Type:
Location: 134361 - 135221 (-)
Gene ID: HRGMv2_0420_1_110
Type: TC
Location: 135336 - 136175 (-)
Gene ID: HRGMv2_0420_1_111
Type: TC
Location: 136777 - 137814 (+)
Gene ID: HRGMv2_0420_1_112
Type: pfam
Location: 137985 - 138353 (+)
Gene ID: HRGMv2_0420_1_113
Type: CAZyme
Location: 138316 - 140034 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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