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Cluster: HRGMv2_0420_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0420_21 HRGMv2_0420_21_27 32064 34046 + 2.A.37.2.5
TC HRGMv2_0420_21 HRGMv2_0420_21_28 33975 35729 - 2.A.53.3.9
pfam HRGMv2_0420_21 HRGMv2_0420_21_29 35878 37887 + FBPase_2
CAZyme HRGMv2_0420_21 HRGMv2_0420_21_30 37992 39866 + GH13_46
TC HRGMv2_0420_21 HRGMv2_0420_21_31 39883 41328 + 2.A.49.6.1
NULL(UNKNOWN) HRGMv2_0420_21 HRGMv2_0420_21_32 41291 41800 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0420_21 HRGMv2_0420_21_33 41814 42362 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0420_21 HRGMv2_0420_21_34 42369 43784 - 9.B.168.1.2
TC HRGMv2_0420_21 HRGMv2_0420_21_35 43907 45520 - 9.B.174.1.1
Gene ID: HRGMv2_0420_21_27
Type: TC
Location: 32064 - 34046 (+)
Gene ID: HRGMv2_0420_21_28
Type: TC
Location: 33975 - 35729 (-)
Gene ID: HRGMv2_0420_21_29
Type: pfam
Location: 35878 - 37887 (+)
Gene ID: HRGMv2_0420_21_30
Type: CAZyme
Location: 37992 - 39866 (+)
Gene ID: HRGMv2_0420_21_31
Type: TC
Location: 39883 - 41328 (+)
Gene ID: HRGMv2_0420_21_32
Type:
Location: 41291 - 41800 (-)
Gene ID: HRGMv2_0420_21_33
Type:
Location: 41814 - 42362 (-)
Gene ID: HRGMv2_0420_21_34
Type: TC
Location: 42369 - 43784 (-)
Gene ID: HRGMv2_0420_21_35
Type: TC
Location: 43907 - 45520 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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