Cluster: HRGMv2_0402_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0402
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0402_32 | HRGMv2_0402_32_5 | 7349 | 8530 | + | 1.B.57.4.6 |
| pfam | HRGMv2_0402_32 | HRGMv2_0402_32_6 | 8645 | 9130 | + | YgbB |
| CAZyme | HRGMv2_0402_32 | HRGMv2_0402_32_7 | 9691 | 10968 | + | GT4 |
| CAZyme | HRGMv2_0402_32 | HRGMv2_0402_32_8 | 10965 | 11756 | + | GT2 |
| CAZyme | HRGMv2_0402_32 | HRGMv2_0402_32_9 | 11955 | 12890 | - | CBM50 |
Gene ID: HRGMv2_0402_32_5
Type: TC
Location: 7349 - 8530 (+)
Type: TC
Location: 7349 - 8530 (+)
Gene ID: HRGMv2_0402_32_6
Type: pfam
Location: 8645 - 9130 (+)
Type: pfam
Location: 8645 - 9130 (+)
Gene ID: HRGMv2_0402_32_7
Type: CAZyme
Location: 9691 - 10968 (+)
Type: CAZyme
Location: 9691 - 10968 (+)
Gene ID: HRGMv2_0402_32_8
Type: CAZyme
Location: 10965 - 11756 (+)
Type: CAZyme
Location: 10965 - 11756 (+)
Gene ID: HRGMv2_0402_32_9
Type: CAZyme
Location: 11955 - 12890 (-)
Type: CAZyme
Location: 11955 - 12890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.