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Cluster: HRGMv2_0402_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0402_20 HRGMv2_0402_20_7 6474 8345 - 1.C.39.4.5
NULL(UNKNOWN) HRGMv2_0402_20 HRGMv2_0402_20_8 8584 9261 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0402_20 HRGMv2_0402_20_9 9314 11296 + 3.D.10.1.5
TC HRGMv2_0402_20 HRGMv2_0402_20_10 11301 12053 + 3.D.10.1.5
pfam HRGMv2_0402_20 HRGMv2_0402_20_11 12772 13197 + HSP20
TC HRGMv2_0402_20 HRGMv2_0402_20_12 13594 14934 + 2.A.66.1.2
pfam HRGMv2_0402_20 HRGMv2_0402_20_13 15297 16970 + DUF6377
peptidase HRGMv2_0402_20 HRGMv2_0402_20_14 17360 18964 - S09.UPW
CAZyme HRGMv2_0402_20 HRGMv2_0402_20_15 19555 21903 - GH3
Gene ID: HRGMv2_0402_20_7
Type: TC
Location: 6474 - 8345 (-)
Gene ID: HRGMv2_0402_20_8
Type:
Location: 8584 - 9261 (+)
Gene ID: HRGMv2_0402_20_9
Type: TC
Location: 9314 - 11296 (+)
Gene ID: HRGMv2_0402_20_10
Type: TC
Location: 11301 - 12053 (+)
Gene ID: HRGMv2_0402_20_11
Type: pfam
Location: 12772 - 13197 (+)
Gene ID: HRGMv2_0402_20_12
Type: TC
Location: 13594 - 14934 (+)
Gene ID: HRGMv2_0402_20_13
Type: pfam
Location: 15297 - 16970 (+)
Gene ID: HRGMv2_0402_20_14
Type: peptidase
Location: 17360 - 18964 (-)
Gene ID: HRGMv2_0402_20_15
Type: CAZyme
Location: 19555 - 21903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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