Cluster: HRGMv2_0399_CGC30
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0399
- CGC Family ID: CGCFAM_04783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0399_23 | HRGMv2_0399_23_9 | 14404 | 15558 | - | GT4 |
| pfam | HRGMv2_0399_23 | HRGMv2_0399_23_10 | 16165 | 18159 | + | Sulfatase |
| pfam | HRGMv2_0399_23 | HRGMv2_0399_23_11 | 18266 | 20095 | - | Sulfatase |
| CAZyme | HRGMv2_0399_23 | HRGMv2_0399_23_12 | 20112 | 20846 | - | GT2 |
| CAZyme | HRGMv2_0399_23 | HRGMv2_0399_23_13 | 21068 | 22087 | + | GT113 |
| pfam | HRGMv2_0399_23 | HRGMv2_0399_23_14 | 22119 | 22949 | + | LicD |
| CAZyme | HRGMv2_0399_23 | HRGMv2_0399_23_15 | 22946 | 23719 | + | GT2 |
| pfam | HRGMv2_0399_23 | HRGMv2_0399_23_16 | 23769 | 24173 | - | CTP_transf_like |
| NULL(UNKNOWN) | HRGMv2_0399_23 | HRGMv2_0399_23_17 | 24179 | 25042 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0399_23 | HRGMv2_0399_23_18 | 25139 | 25930 | - | GT11 |
| NULL(UNKNOWN) | HRGMv2_0399_23 | HRGMv2_0399_23_19 | 26049 | 26864 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0399_23 | HRGMv2_0399_23_20 | 26870 | 27799 | - | Lip_A_acyltrans |
| TC | HRGMv2_0399_23 | HRGMv2_0399_23_21 | 27842 | 29695 | - | 3.A.1.106.1 |
Gene ID: HRGMv2_0399_23_9
Type: CAZyme
Location: 14404 - 15558 (-)
Type: CAZyme
Location: 14404 - 15558 (-)
Gene ID: HRGMv2_0399_23_10
Type: pfam
Location: 16165 - 18159 (+)
Type: pfam
Location: 16165 - 18159 (+)
Gene ID: HRGMv2_0399_23_11
Type: pfam
Location: 18266 - 20095 (-)
Type: pfam
Location: 18266 - 20095 (-)
Gene ID: HRGMv2_0399_23_12
Type: CAZyme
Location: 20112 - 20846 (-)
Type: CAZyme
Location: 20112 - 20846 (-)
Gene ID: HRGMv2_0399_23_13
Type: CAZyme
Location: 21068 - 22087 (+)
Type: CAZyme
Location: 21068 - 22087 (+)
Gene ID: HRGMv2_0399_23_14
Type: pfam
Location: 22119 - 22949 (+)
Type: pfam
Location: 22119 - 22949 (+)
Gene ID: HRGMv2_0399_23_15
Type: CAZyme
Location: 22946 - 23719 (+)
Type: CAZyme
Location: 22946 - 23719 (+)
Gene ID: HRGMv2_0399_23_16
Type: pfam
Location: 23769 - 24173 (-)
Type: pfam
Location: 23769 - 24173 (-)
Gene ID: HRGMv2_0399_23_17
Type:
Location: 24179 - 25042 (-)
Type:
Location: 24179 - 25042 (-)
Gene ID: HRGMv2_0399_23_18
Type: CAZyme
Location: 25139 - 25930 (-)
Type: CAZyme
Location: 25139 - 25930 (-)
Gene ID: HRGMv2_0399_23_19
Type:
Location: 26049 - 26864 (-)
Type:
Location: 26049 - 26864 (-)
Gene ID: HRGMv2_0399_23_20
Type: pfam
Location: 26870 - 27799 (-)
Type: pfam
Location: 26870 - 27799 (-)
Gene ID: HRGMv2_0399_23_21
Type: TC
Location: 27842 - 29695 (-)
Type: TC
Location: 27842 - 29695 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp902495455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.