PROTEIN: HRGMv2_0399_23_19
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Protein File & Metadata
Source:
HRGMv2_0399_23_19.pdb
Genome ID:
Protein ID:
HRGMv2_0399_23_19
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Protein Sequence
MKRIFITYGD HNYEDSLQRI KAEAEATGIF DEIIIYTPDN LPEPFKGYTT KYKRGGGYWL 60 WKPYIIKDTL DNANDGDIIV YVDAGCTVQK SKDWFRYFNR LRSKRGIFFI ACGKSQKWCK 120 KEVFDLFHTR NNLWKHANQI QATFIIIKKT ADNDVVDRWF EAAKSHPSLF TDVEEEERGN 180 EDKCFKEHRH DQSVLTACVC TSDNLLQYSL IPEKMEKIHA GGQAVVASRI SSQGRRSTNP 240 TQALYLDVVE RYILNPIKGF ITKALFLLSR F 271
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0K0ELX8-F1-model_v4 | 1 | 234 | 58 | 310 | 0.6216 |
0.7856 |
| AF-O02339-F1-model_v4 | 1 | 235 | 92 | 342 | 0.5975 |
0.7746 |
| AF-Q9XU71-F1-model_v4 | 1 | 235 | 90 | 340 | 0.596 |
0.7703 |
| AF-O45513-F1-model_v4 | 1 | 235 | 92 | 343 | 0.5945 |
0.7705 |
| AF-O45704-F1-model_v4 | 1 | 237 | 97 | 344 | 0.5936 |
0.7651 |
| AF-Q9XXL4-F1-model_v4 | 1 | 235 | 108 | 354 | 0.5897 |
0.7758 |
| AF-G5ECJ3-F1-model_v4 | 1 | 254 | 122 | 402 | 0.5784 |
0.7651 |
| AF-O17853-F1-model_v4 | 1 | 228 | 102 | 358 | 0.5738 |
0.7785 |
| AF-Q9TXY5-F1-model_v4 | 1 | 234 | 116 | 369 | 0.5732 |
0.7697 |
| AF-Q9N4X7-F1-model_v4 | 1 | 236 | 126 | 378 | 0.5645 |
0.7592 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1X9Z5W1-F1-model_v4 | GT6 | 1 | 237 | 1 | 230 | 0.6449 |
0.7347 |
| AF-A0A2S0N6H8-F1-model_v4 | GT32 | 1 | 270 | 1 | 254 | 0.6269 |
0.676 |
| AF-A0A4D7QDU1-F1-model_v4 | GT32 | 1 | 268 | 1 | 252 | 0.6265 |
0.6746 |
| AF-A0A448L2U4-F1-model_v4 | GT6 | 1 | 237 | 1 | 230 | 0.6261 |
0.7342 |
| AF-L0NDD0-F1-model_v4 | GT32 | 1 | 269 | 1 | 256 | 0.6256 |
0.6756 |
| L0NDD0 | GT32 | 1 | 269 | 1 | 256 | 0.6256 |
0.6756 |
| AF-A0A4D7AWJ4-F1-model_v4 | GT32 | 1 | 268 | 1 | 253 | 0.6246 |
0.6708 |
| AF-D1B3X0-F1-model_v4 | GT6 | 1 | 236 | 2 | 234 | 0.6206 |
0.7218 |
| QWL65355.1 | GT6 | 1 | 237 | 5 | 247 | 0.6194 |
0.7189 |
| AF-E4TIL1-F1-model_v4 | GT6 | 1 | 243 | 2 | 258 | 0.6189 |
0.6999 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A730K586 | GT6 | 1 | 236 | 1 | 230 | 0.6593 |
0.7414 |
| A0A7G9NZ97 | GT34 | 1 | 239 | 2 | 206 | 0.6378 |
0.774 |
| A0A2S0N6H8 | GT32 | 1 | 270 | 1 | 254 | 0.6269 |
0.676 |
| L0NDD0 | GT32 | 1 | 269 | 1 | 256 | 0.6256 |
0.6756 |
| UBK78247.1 | GT6 | 1 | 236 | 2 | 231 | 0.6221 |
0.733 |
| A0A249JZB6 | GT6 | 1 | 236 | 2 | 265 | 0.6206 |
0.7253 |
| ULQ57420.1 | GT6 | 1 | 236 | 1 | 234 | 0.6197 |
0.7263 |
| QWL65355.1 | GT6 | 1 | 237 | 5 | 247 | 0.6194 |
0.7189 |
| E4TIL1 | GT6 | 1 | 243 | 2 | 258 | 0.6189 |
0.6999 |
| A0A6M3Y513 | GT6 | 1 | 236 | 6 | 242 | 0.617 |
0.7105 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2p6w-assembly1.cif.gz_A | 1 | 238 | 1 | 202 | 0.6419 |
0.7647 |
| 2p72-assembly2.cif.gz_B | 1 | 238 | 1 | 201 | 0.6407 |
0.7636 |
| 4cjc-assembly4.cif.gz_D | 1 | 235 | 1 | 236 | 0.631 |
0.702 |
| 4ayl-assembly1.cif.gz_A | 1 | 236 | 1 | 209 | 0.6132 |
0.7142 |
| 4frl-assembly1.cif.gz_A | 1 | 236 | 45 | 276 | 0.5913 |
0.7109 |
| 1vzt-assembly2.cif.gz_B | 1 | 235 | 46 | 283 | 0.5899 |
0.7127 |
| 3sx8-assembly1.cif.gz_A | 1 | 235 | 53 | 274 | 0.5656 |
0.7047 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5JBG6-F1-model_v4 | 1 | 236 | 1 | 230 | 0.6603 |
0.7424 |
| AF-O06484-F1-model_v4 | 1 | 242 | 1 | 270 | 0.6075 |
0.7303 |
| AF-O31542-F1-model_v4 | 1 | 244 | 2 | 265 | 0.6002 |
0.7245 |
| AF-P27128-F1-model_v4 | 1 | 241 | 27 | 283 | 0.5625 |
0.7122 |