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Cluster: HRGMv2_0398_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0398_3 HRGMv2_0398_3_11 11286 12839 + 3.B.1.1.2
NULL(UNKNOWN) HRGMv2_0398_3 HRGMv2_0398_3_12 12867 13202 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0398_3 HRGMv2_0398_3_13 13226 13687 + 3.B.1.1.2
peptidase HRGMv2_0398_3 HRGMv2_0398_3_14 13973 16117 + S46.UPW
TC HRGMv2_0398_3 HRGMv2_0398_3_15 16499 19666 - 1.B.14.6.3
CAZyme HRGMv2_0398_3 HRGMv2_0398_3_16 20156 24028 - GH31_18
pfam HRGMv2_0398_3 HRGMv2_0398_3_17 24229 25152 - UbiA
NULL(UNKNOWN) HRGMv2_0398_3 HRGMv2_0398_3_18 25237 25884 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0398_3 HRGMv2_0398_3_19 26046 26666 - 2.A.115.2.14
TC HRGMv2_0398_3 HRGMv2_0398_3_20 26731 28104 - 2.A.66.1.32
Gene ID: HRGMv2_0398_3_11
Type: TC
Location: 11286 - 12839 (+)
Gene ID: HRGMv2_0398_3_12
Type:
Location: 12867 - 13202 (+)
Gene ID: HRGMv2_0398_3_13
Type: TC
Location: 13226 - 13687 (+)
Gene ID: HRGMv2_0398_3_14
Type: peptidase
Location: 13973 - 16117 (+)
Gene ID: HRGMv2_0398_3_15
Type: TC
Location: 16499 - 19666 (-)
Gene ID: HRGMv2_0398_3_16
Type: CAZyme
Location: 20156 - 24028 (-)
Gene ID: HRGMv2_0398_3_17
Type: pfam
Location: 24229 - 25152 (-)
Gene ID: HRGMv2_0398_3_18
Type:
Location: 25237 - 25884 (-)
Gene ID: HRGMv2_0398_3_19
Type: TC
Location: 26046 - 26666 (-)
Gene ID: HRGMv2_0398_3_20
Type: TC
Location: 26731 - 28104 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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