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Cluster: HRGMv2_0390_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0390_15 HRGMv2_0390_15_33 35306 38077 + GH2
pfam HRGMv2_0390_15 HRGMv2_0390_15_34 38389 40281 + Toprim | Zn_ribbon_DnaG | DNAG_N | DnaB_bind | Toprim_2 | Toprim_4
pfam HRGMv2_0390_15 HRGMv2_0390_15_35 40423 41847 + PLDc | PLDc_2 | PLDc_2 | PLDc_N
TC HRGMv2_0390_15 HRGMv2_0390_15_36 41984 42400 + 2.A.7.2.1
pfam HRGMv2_0390_15 HRGMv2_0390_15_37 42693 44195 + Phosphodiest
pfam HRGMv2_0390_15 HRGMv2_0390_15_38 44400 45245 + DUF3737
TC HRGMv2_0390_15 HRGMv2_0390_15_39 45342 46232 + 2.A.7.3.22
TC HRGMv2_0390_15 HRGMv2_0390_15_40 46229 47464 + 9.B.169.1.8
Gene ID: HRGMv2_0390_15_33
Type: CAZyme
Location: 35306 - 38077 (+)
Gene ID: HRGMv2_0390_15_34
Type: pfam
Location: 38389 - 40281 (+)
Gene ID: HRGMv2_0390_15_35
Type: pfam
Location: 40423 - 41847 (+)
Gene ID: HRGMv2_0390_15_36
Type: TC
Location: 41984 - 42400 (+)
Gene ID: HRGMv2_0390_15_37
Type: pfam
Location: 42693 - 44195 (+)
Gene ID: HRGMv2_0390_15_38
Type: pfam
Location: 44400 - 45245 (+)
Gene ID: HRGMv2_0390_15_39
Type: TC
Location: 45342 - 46232 (+)
Gene ID: HRGMv2_0390_15_40
Type: TC
Location: 46229 - 47464 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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